Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1218 ATGCGACTTTTACTTCTCCTCCTCCTCCTCCACCTCCACGTCACCGCCCTCTCCGGCCGCATCTCCGAGCGCCGCGCCCTTCTCTCCTTCAAAGCCGACTCCATAACCGCCGACCCCACCCGCGCCCTCTCCTCCTGGTCCCCCTCCTCCCCCGACCACTGCACGTGGCGCGGCGTCAAGTGCGACCCCCGCCGGCACGTGACCTCCATCAACCTCAGCTCACTGTCCCTCTCCGGCACCCTCTCCGACAGCCTCTCTTACCTCTCCTTCCTTGCAAACCTCTCCCTCTCCGACAACAAGCTCACAGGCCCCATCCCTCCTTCCCTCTCCTCCCTAGCAAACCTCAACTGCCTCAACCTCTCCAACAACGTCTTCAACGGTACATTCCCTGACCAGCTCTCTGTCCTCAACAACCTCAAAGTCCTCGACCTCTATAACAACAACATGAGCGGCCCACTCCCCGTCGCCGTCACGGAGATGCGCGAGCTCCGCCACTTGCACCTCGGCGGAAACTTCTTCTCCGGCGAGATCCCGCCGGAGTACGGGCGCTGGAAGCACCTCGAATACCTCGCTGTCTCCGGCAACGAGCTGGCCGGCAAAATCCCGCCTGAGATCGGGAACCTCTCGGCTCTCCGGGAGCTCTACGTCGGGTACTACAACACCTACGACGGCGGCATCCCGCCGGAGATCGGGAACCTCTCGGAGCTCGTGAGGCTCGACGCCGCGTACTGCGGATTATCGGGCGAGATTCCGGCGGAGATAGGGAAGCTTCAGAACCTCGACACCTTGTTCCTTCAGGTGAATGCGCTCTCCGGTTCCCTCACGCCGGAGCTAGGTAGCCTCAAGAGCTTGAAGTCCATGGACCTGTCGAACAACGCGCTTTCCGGCGAGGTTCCGGCGAGTTTCGCGGGGCTGAAGAACCTCACGCTTTTGAACTTGTTCCGGAACAAGCTTCACGGTGCGATTCCCGAGTTCGTTGGGCGGCTTCCGGCGCTGGAAGTTTTGCAGCTTTGGGAGAACAACTTCACCGGAAGCATTCCCCAGAGCTTGGGGAACAATGGGAGGCTAACCATCGTTGATCTCTCTTCGAACAAGTTGACTGGGGTTTTACCTCCTGATATGTGTTCTGGGAACCGTCTTCAGACGCTGATAACACTGGGCAATTTTCTCTTTGGCCCCATCCCTGATTCCCTCGGGAAGTGCGAGTCTTTGAGCAGGGTCCGCATGGGTGACAATTTTCTCAACGGTTCCATCCCAAAGGGACTCTTCGGGCTTCCGAAGCTAACTCAGGTTGAGCTTCAGGGCAATCTTCTCTCCGGGCAGTTCCCTGAGTCTGGTTCCGTGGCTCCTAACCTCGGCCAGATTTCTCTCTCGAACAACCACCTTTCTGGGCCTCTGCCACCCACCATTGGCAACTTCTCCGGCATGCAAAAGCTTCTTCTTGACGGGAACCAGTTTTCGGGTCGGATCCCTCCCGAGATTGGGAGGCTGCAGCAGCTCTCGAAGATGGATTTCAGCAACAATAAGTTCTTGGGTCCCATGGCGCCAGAGATAAGCCATTGCAAGTTGCTCACTTTCGTTGATCTCAGCCGAAACGACCTCTCTGGTGAGGTTCCGAACGAGATCACTGGCATGCGGATACTGAACTACTTGAACCTCTCCAGGAACCACCTGGTTGGCCCCATTCCCGGGTCTATATCCTCCATGCAGAGTTTAACTTCCGTGGATTTTTCTTACAACAATCTCTCTGGTTTGGTTCCTGGCACTGGCCAATTCAGCTACTTCAACTACACTTCTTTCCTAGGCAACCCTGAACTCTGTGGCCCATATTTGGGTCCTTGCAAAGACGGGGTCGAAAACGGCCCTCGCCAGCCTCATTTCGCCGTTGCGGCGATATTCAAGGCCAGGTCCTTGAAGAAGGCCAGCGAAGCTCGCGCGTGGAAATTGACCGCGTTCCAGCGCTTGGACTTCACTGTTGATGATGTTTTGGACTGCTTGAAGGAGGATAACATAATAGGGAAAGGAGGTGCAGGGATTGTTTACAAAGGTGCAATGCCTAATGGTGACCAAGTTGCTGTAAAGAGGCTTCCAGCTATGAGCAGGGGCTCTTCCCATGACCACGGTTTTAACGCTGAGATTCAGACTTTGGGGCGGATTCGGCACAGGCACATTGTTAGGTTGTTGGGATTCTGTTCAAACCATGAGACGAATCTTTTGGTGTATGAGTACATGCCTAATGGGAGCTTGGGTGAGGTTCTTCATGGTAAGAAAGGGGGTCATTTGCATTGGGACACCAGGTACAAAATCGCTGTGGAGGCTGCAAAGGGGCTGTGCTATCTGCACCATGACTGCTCCCCGCTCATTGTGCACCGAGATGTGAAATCGAATAATATCCTTCTGGATTCCAGTTTTGAAGCCCATGTTGCTGATTTCGGGCTTGCTAAGTTCCTCCAAGATTCCGGAACATCCGAGTGCATGTCTGCAATTGCCGGGTCATATGGATACATTGCTCCAGAGTATGCCTACACGTTGAAAGTTGATGAGAAAAGCGATGTTTACAGCTTTGGTGTGGTTCTTTTGGAGCTCGTAGCGGGCAGGAAACCCGTTGGAGAATTCGGTGATGGTGTGGACATTGTGCAATGGGTTAGGAAAATGACAGACTCAAACAAGGAAGGGGTACTTAAAGTTCTTGATCCTAGGCTTCCCTCAGTTCCACTCCATGAGGTGATGCATGTTTTCTATGTGGCCATGCTGTGTGTTGAAGAACAGGCGGTGGAGCGACCGACTATGCGCGAAGTTGTTCAAATTCTGACCGAGCTTCCGAAGCCGCCTAGCTCGAAGCAGGGAGACTCAGCAATCACAGAGTCCTCTTTGTCATCATCAAACAGTTTAGAGTCTCCAACCACAGCATCTAAAGAGCCTCCAAAAGATCATCAAGACCCCCCTCAGTCGCCACCACCTGATCTTCTTAGCATTTGA 2979 0.5431 MRLLLLLLLLHLHVTALSGRISERRALLSFKADSITADPTRALSSWSPSSPDHCTWRGVKCDPRRHVTSINLSSLSLSGTLSDSLSYLSFLANLSLSDNKLTGPIPPSLSSLANLNCLNLSNNVFNGTFPDQLSVLNNLKVLDLYNNNMSGPLPVAVTEMRELRHLHLGGNFFSGEIPPEYGRWKHLEYLAVSGNELAGKIPPEIGNLSALRELYVGYYNTYDGGIPPEIGNLSELVRLDAAYCGLSGEIPAEIGKLQNLDTLFLQVNALSGSLTPELGSLKSLKSMDLSNNALSGEVPASFAGLKNLTLLNLFRNKLHGAIPEFVGRLPALEVLQLWENNFTGSIPQSLGNNGRLTIVDLSSNKLTGVLPPDMCSGNRLQTLITLGNFLFGPIPDSLGKCESLSRVRMGDNFLNGSIPKGLFGLPKLTQVELQGNLLSGQFPESGSVAPNLGQISLSNNHLSGPLPPTIGNFSGMQKLLLDGNQFSGRIPPEIGRLQQLSKMDFSNNKFLGPMAPEISHCKLLTFVDLSRNDLSGEVPNEITGMRILNYLNLSRNHLVGPIPGSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVENGPRQPHFAVAAIFKARSLKKASEARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSSFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVAGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPSSKQGDSAITESSLSSSNSLESPTTASKEPPKDHQDPPQSPPPDLLSI* 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1218 992 Pfam Protein tyrosine and serine/threonine kinase 668 937 IPR001245 GO:0004672|GO:0006468
Dod05g1218 992 SMART serkin_6 666 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1218 992 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 627 978 - -
Dod05g1218 992 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 626 - -
Dod05g1218 992 Gene3D Transferase(Phosphotransferase) domain 1 744 959 - -
Dod05g1218 992 Pfam Leucine rich repeat 259 318 IPR001611 GO:0005515
Dod05g1218 992 Gene3D Ribonuclease Inhibitor 326 620 IPR032675 -
Dod05g1218 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Dod05g1218 992 SMART LRR_typ_2 354 377 IPR003591 -
Dod05g1218 992 SMART LRR_typ_2 473 497 IPR003591 -
Dod05g1218 992 SMART LRR_typ_2 281 304 IPR003591 -
Dod05g1218 992 SMART LRR_typ_2 569 592 IPR003591 -
Dod05g1218 992 SMART LRR_typ_2 160 184 IPR003591 -
Dod05g1218 992 SMART LRR_typ_2 88 112 IPR003591 -
Dod05g1218 992 SMART LRR_typ_2 329 353 IPR003591 -
Dod05g1218 992 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 627 978 - -
Dod05g1218 992 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 626 - -
Dod05g1218 992 ProSiteProfiles Protein kinase domain profile. 666 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1218 992 MobiDBLite consensus disorder prediction 941 970 - -
Dod05g1218 992 Gene3D Ribonuclease Inhibitor 20 220 IPR032675 -
Dod05g1218 992 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Dod05g1218 992 MobiDBLite consensus disorder prediction 941 992 - -
Dod05g1218 992 Gene3D Phosphorylase Kinase; domain 1 632 743 - -
Dod05g1218 992 SUPERFAMILY Protein kinase-like (PK-like) 659 937 IPR011009 -
Dod05g1218 992 Gene3D Ribonuclease Inhibitor 221 325 IPR032675 -
Dod05g1218 992 SUPERFAMILY L domain-like 355 614 - -
Dod05g1218 992 SUPERFAMILY RNI-like 69 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1218 Dod-Chr5 34635262 34639266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1218 13 975 Receptor kinase-like Gene Family AT5G65700 77.879 0.0 1543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod05g1218 PK_Tyr_Ser-Thr 9.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1218 - - gmx:100499646 1653.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0850 02 10895024 10897501 Dod05g1218 05 34635262 34639266 PCT