Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1204 ATGAAGACCATGGAAAATGATGATGCTGTTGACGTTAACAATCAGAACAACTGGTTGGGTTTCTCGCTCTCTCCTCAAATGAATATAGGTGTTCCTCCACACCTTCATGAGCCCCACCAGCCTTCCTCTGCTGCCGCTGCTGAAGTGGTAATTCCAGCAAGCTTTTACCATGCTGCTCCTCTTAACAACTATGGCTATGGCTTTTACTATTATGGACTTGAGGCTGAAAATGTTGGGTTGTACCCGGCCATGCCTGCCATGCCCCTCAAATCTGATGGCACCCTCTATGGAATGGAACCTCTTAGCAGGTCACAACCACAAGCAATGGCTACTAGTTCAACGCCAAAACTGGAGAATTTCTTAGGTGGCGAGGCCATGGGGACCCCTCAATATGAATATAGTAGTGCCACTGAAGCAATGCCTCTGAGCCTAGACAGCATGTTTTATAACCACTCCTCACGCCGTGAGCCAAACAACTCAAACTACCAAAACCAAGTACAAGACATGACTAGCCAACAACAACAACAGCAACAACAAGAGCTTCATGCCCAGCACTTATCATATTACTCTACTTTGAGAAACCATGATGTGATGTTAGAAGGGTCAACGCAAAGTCAAACTCCAGATGGAAATCTTCAGATGCATAATAACATGGCTGAGGATGGAATTCCTGGGTTTAAGAACTGGGTGGTGAGGAAGTTGCAAGCTAGCCATGCACAGGATTCAAAGATGATTATTCCTTTGGAGGATAATGGAGGTGAATCTGGTTCCAATATTGGATCAATAGCTCCATATGGGGATTTACAGTCTTTAAGCTTGTCCATGAGTCCTAGCTCACAATCAAGCTGTGTTACAAGTCCACAGCGTGCATCACCTGCTGTCATTGATTCTATTGTTGCCATGGATACAAAGAAAAGGGGACCGGAAAAGGTTGACCAGAAGCAAATTGTTCATAGGAAATCCATAGATACCTTTGGACAAAGAACCTCCCAATATAGAGGTGTAACAAGGCATAGGTGGACTGGTAGATATGAAGCTCATCTATGGGACAACAGCTGCAAGAAAGAGGGCCAAAGCAGGAAAGGAAGGCAAGTTTATCTAGGGGGCTATGATATGGAAGAAAAAGCTGCGAGAGCCTATGATCTGGCCGCACTAAAGTATTGGGGACCCTCCACTCACATTAACTTCCCTTTGGAAAATTATCAAAATGAACTTGAGGAAATGAAGAACATGACCAGACAGGAATATGTTGCTCACTTACGAAGAAAAAGCAGCGGATTCTCGAGAGGAGCTTCCATGTACAGAGGAGTGACAAGACACCACCAACACGGAAGGTGGCAGGCTCGGATTGGTAGGGTGGCAGGAAACAAAGATCTATATCTTGGAACCTTCAGTACCCAAGAGGAAGCGGCTGAAGCCTACGATATAGCTGCTATAAAATTCCGAGGGGTTAATGCCGTGACCAACTTTGACATAACAAGATATGATGTGGAAAAAATCATGGCAAGCAACAACCTTCTTAGCAGTGAACTAGCTAGGAGGAACAAAGAGATAGATGGTGGAACCCATTACATTGATCACAAGCCTCCTTCATATGATGACAACCATGAAGCCATTCTAATGCAAAAGAGCTGCGGAAGCCAATCGGAACAGTGGAAGATGGTTCTCTATCAATCCACCCAACAACTTGACCAGAACCCACCAAGAATCGAGTCAGTGGCATTAGATAACATGTTCTATCAAGAAGTAGAGGAACAACCAAGTAAGATGAGAACGCATGTACACGTGTCAAATTCTTCTTCACTGGCTACAAGCTTGAACAGCTCAAGAGAAGGCAGCCCAGATAGGACAAGCTTGCCAATGCTCTCTGGAATGCCTTCAACAAAACTATTGGCTGCTGGTCCAAATAGCAACGTGAATTCTTGGGATCCATCACCGCATCTGAGGCCTGCACTTTCTTTGCCTCAGATGCCAGTTATTGCTGCTTGGACAGATGCATAG 2001 0.4503 MKTMENDDAVDVNNQNNWLGFSLSPQMNIGVPPHLHEPHQPSSAAAAEVVIPASFYHAAPLNNYGYGFYYYGLEAENVGLYPAMPAMPLKSDGTLYGMEPLSRSQPQAMATSSTPKLENFLGGEAMGTPQYEYSSATEAMPLSLDSMFYNHSSRREPNNSNYQNQVQDMTSQQQQQQQQELHAQHLSYYSTLRNHDVMLEGSTQSQTPDGNLQMHNNMAEDGIPGFKNWVVRKLQASHAQDSKMIIPLEDNGGESGSNIGSIAPYGDLQSLSLSMSPSSQSSCVTSPQRASPAVIDSIVAMDTKKRGPEKVDQKQIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASNNLLSSELARRNKEIDGGTHYIDHKPPSYDDNHEAILMQKSCGSQSEQWKMVLYQSTQQLDQNPPRIESVALDNMFYQEVEEQPSKMRTHVHVSNSSSLATSLNSSREGSPDRTSLPMLSGMPSTKLLAAGPNSNVNSWDPSPHLRPALSLPQMPVIAAWTDA* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1204 666 ProSiteProfiles AP2/ERF domain profile. 331 397 IPR001471 GO:0003700|GO:0006355
Dod05g1204 666 CDD AP2 330 397 IPR001471 GO:0003700|GO:0006355
Dod05g1204 666 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 664 - -
Dod05g1204 666 MobiDBLite consensus disorder prediction 589 643 - -
Dod05g1204 666 ProSiteProfiles AP2/ERF domain profile. 433 491 IPR001471 GO:0003700|GO:0006355
Dod05g1204 666 MobiDBLite consensus disorder prediction 592 643 - -
Dod05g1204 666 MobiDBLite consensus disorder prediction 150 182 - -
Dod05g1204 666 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 14 664 - -
Dod05g1204 666 PRINTS Ethylene responsive element binding protein signature 473 493 IPR001471 GO:0003700|GO:0006355
Dod05g1204 666 PRINTS Ethylene responsive element binding protein signature 332 343 IPR001471 GO:0003700|GO:0006355
Dod05g1204 666 Coils Coil 398 418 - -
Dod05g1204 666 Coils Coil 159 179 - -
Dod05g1204 666 CDD AP2 432 493 IPR001471 GO:0003700|GO:0006355
Dod05g1204 666 Pfam AP2 domain 331 389 IPR001471 GO:0003700|GO:0006355
Dod05g1204 666 Pfam AP2 domain 434 483 IPR001471 GO:0003700|GO:0006355
Dod05g1204 666 Gene3D AP2/ERF domain 433 493 IPR036955 GO:0003700|GO:0006355
Dod05g1204 666 Gene3D AP2/ERF domain 330 399 IPR036955 GO:0003700|GO:0006355
Dod05g1204 666 SUPERFAMILY DNA-binding domain 330 399 IPR016177 GO:0003677
Dod05g1204 666 SMART rav1_2 433 497 IPR001471 GO:0003700|GO:0006355
Dod05g1204 666 SMART rav1_2 331 403 IPR001471 GO:0003700|GO:0006355
Dod05g1204 666 SUPERFAMILY DNA-binding domain 432 492 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1204 Dod-Chr5 34124656 34129122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1204 261 515 AP2-EREBP Transcription Factor Family AT4G37750 75.532 9.94e-146 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Dod05g1204 AP2 1.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1204 K09285 - gmx:100787611 934.865