Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1169 ATGGCAGGGAAAGTGTCGAAGGTGGCATTTGATTCAAAGATGTGGAAGCTTCTGAGAGAGTACAGCCAGGTCCTGGTGGTTACCTCCAACAATGTTGGCTCCAACCACATCAATGGCATTCGAAGGGGCTTACATGGTGACTCTATGGTAGTTATGGGCAAGAACTCCATGATGAGGCGCTCTTTCATGCTTGAGGCTCAAAGGACTGCCAACAAGGCTTTTCTCAATCTTATCCCCCTTCTTAAGGGCAACGTAGCATTGATTTTCACTAAAGGTGATATGAAGAAGGTTAGCGAAGAGGTTTCCAAGTTCAAGATGCAGCTGAGGGCATCTTTGTCTTCTGGGTGGACGCGATGTCGATGTCGTGGCAGCTGGTTCCCTCTTGCTATCACAGCTAAGGAAGAGAAGATTATAAGTGGGACTGAGAGCCAATCACCTGAGCTAGAGGCGAGGTGGCAGCAGCATCACATAGCATAG 477 0.4843 MAGKVSKVAFDSKMWKLLREYSQVLVVTSNNVGSNHINGIRRGLHGDSMVVMGKNSMMRRSFMLEAQRTANKAFLNLIPLLKGNVALIFTKGDMKKVSEEVSKFKMQLRASLSSGWTRCRCRGSWFPLAITAKEEKIISGTESQSPELEARWQQHHIA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1169 158 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 1 107 - -
Dod05g1169 158 Gene3D - 4 117 IPR043141 -
Dod05g1169 158 SUPERFAMILY Ribosomal protein L10-like 7 106 IPR043141 -
Dod05g1169 158 Pfam Ribosomal protein L10 6 104 IPR001790 -
Dod05g1169 158 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1169 Dod-Chr5 33021252 33026551 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1169 7 106 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 61.000 5.92e-42 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1169 K02941 - mnt:21409050 140.584