Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1168 ATGATGGGCGATGATGAGATTGGTGCTAATACGGTGGTGAGAGAGTTCGACCCAAATAAGGACAGAGAGGGAGTGGAAGCCGTTGAAAGGATATGCGAGGTTGGACCCAGTGAGAAGCTTTCCCTCTTCACCGACCTACACGGTGACCCAATTTGCAGGGTCCGCCACTCACCTACTTTCCGCATGCTGGTGGCTGAGCTAGGCGATGAAATAGTGGGAATGATAAGGGGTTGCATCAAAACCGTTACATGCGGAAAAAAGCTCTGCAGACACGGAAAAAACAACGCTAACAACCACAATGACAACAACATAACTGAACCCATCCAAACCACCGCCAAACAAGTCCCTGTCTACACCAAACTCGCCTACATATTAGGCCTCCGTGTTTCTCCATCCCACAGGAGAATGGGGATAGGCCTTAAGCTGGTGAGAACGATGGAGCAATGGTTCAGGGACAACGGCGCAGAGTACGCGTACATCGCAACGGAAAACGACAACGTTGCGTCCGTTAAGCTCTTCACCGACAAATGCGGGTACTCCAAGTTCCGCACCCCGTCCATCCTCGTGAACCCCGTTTTCGCCCACAAAATCAGGACCTCACAAAATATCACCATCATAAGGCTCAACCCAAACGACGCCGAATTGCTCTACCGCCTCCGTTTTTCAACAACGGAGTTCTTCCCGCGCGACATTGATTCCGTCCTCAACAACAAGCTCTCCCTCGGCACCTACCTTGCCGTCCCCAAGGGCTCTTACGGGCCCGATACGTGGCCCGGCCCGGCTCAATTCCTCGCGCGCCCGCCTCACTCCTGGGCCGTCCTCAGCGTCTGGAACTGCAAAGACGTGTTCACGCTAGAGGTGAGGGGCGCGTCGCGCGTGAAGCGCGCTCTGGCGAGAACAACGCGGGTTTTGGACCGGGCTTTCCCGTGGCTTCGGTTGCCTTCGATCCCGAATTTTTTCAGGCCGTTCGGGCTTCACTTTCTGTACGGGCTCGGAGGGGAGGGGCCCGAGGGGGCGAAGATGGTGCGGGCCTTGTGCGGGTTCGCGCATAATTTGGCCAGAGAGCTTGGGTGCGGGGTGGTGGCGACAGAGGTTTCGAGCCGCGAACCGTTGCGGCTGGGGGTTCCGCACTGGAAGATGCTGTCGTGTGATGAGGACTTATGGTGCATCAAGCGGCTTGGGGAGGATTACAGTGATGGTTCGGTTGGTGACTGGACCAAATCTCCACCTGGATTCTCTATTTTTGTTGACCCCAGAGAGTTCTGA 1266 0.5577 MMGDDEIGANTVVREFDPNKDREGVEAVERICEVGPSEKLSLFTDLHGDPICRVRHSPTFRMLVAELGDEIVGMIRGCIKTVTCGKKLCRHGKNNANNHNDNNITEPIQTTAKQVPVYTKLAYILGLRVSPSHRRMGIGLKLVRTMEQWFRDNGAEYAYIATENDNVASVKLFTDKCGYSKFRTPSILVNPVFAHKIRTSQNITIIRLNPNDAELLYRLRFSTTEFFPRDIDSVLNNKLSLGTYLAVPKGSYGPDTWPGPAQFLARPPHSWAVLSVWNCKDVFTLEVRGASRVKRALARTTRVLDRAFPWLRLPSIPNFFRPFGLHFLYGLGGEGPEGAKMVRALCGFAHNLARELGCGVVATEVSSREPLRLGVPHWKMLSCDEDLWCIKRLGEDYSDGSVGDWTKSPPGFSIFVDPREF* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1168 421 PANTHER N-ACETYLTRANSFERASE 11 421 - -
Dod05g1168 421 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 11 421 - -
Dod05g1168 421 CDD NAT_SF 62 160 - -
Dod05g1168 421 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 199 IPR000182 GO:0016407
Dod05g1168 421 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 51 181 IPR016181 -
Dod05g1168 421 Gene3D - 45 185 - -
Dod05g1168 421 Pfam Acetyltransferase (GNAT) family 57 179 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1168 Dod-Chr5 33013308 33015662 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dod05g1168 Acetyltransf_1 1.9e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1168 - - lang:109348839 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1168 05 33013308 33015662 Dod05g1168 05 33013308 33015662 ECH
Dod02g0786 02 10257815 10259482 Dod05g1168 05 33013308 33015662 PCT