Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1167 ATGGTTACGGAAGGCCCTCGCAATTCACTTTCGCTTTCACCTTCACCTCCCCCGTGTCTCGCGACTCACACAAGTTCCTCTCTCTCCTGCGCACTCAACCTCGTTCCCTTCCCTCTCCCACATCGCCCCGAGCCCTTCCACTCATTTTCTTCCTCCGCCACCTGGCCTCACGCGCCGCCTGCCCCGCTCCCTCACCCTCCGCCACCAGCAGCAGCCGCCGCCGTCGACACCCTGGCGCAGAAGATTGGGAAGTCCACGCGCCGGCCCGGCGCGTCGTCGAAGGCGAGGGTTTACGCCGACGTCAACGTCGTTCGCCCAAAGGAATATTGGGACTATGAGTCCTTCAACGTGCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTGTTTGAGGGTGTTCATTGCACTGATAACGAAAAATGCGTCATCAAGATCCTCAAGCCCGTGAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGACCCAATATTGTAAAGTTGCTTGACATTGTGAGAGATCAGCAGTCAAAGACCCCAAGCCTTATATTTGAATATGTTAATAACACTGATTTCAAAGTTCTTTATCCTACACTGTCAGACTATGATATACGATATTATATCTTTGAACTTCTAAAGGCAAGTGCATTGGATTATTGCCACTCCCAAGGAATCATGCATCGGGATGTAAAGCCACATAATGTGATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGGAAAGAATATAATGTTCGCGTTGCCTCCAGATATTTCAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGACTATGACTATTCTTTAGATTTATGGAGTCTTGGTTGTATGCTTGCTGGGATGATATTCCGCAAGGAGCCATTCTTTTATGGACATGATAACTATGATCAACTGGTCAAAATAGCTAAGGTACTCGGAACAGATGAATTAAGTGCATATTTGAATAAATATCACATAGAATTGGACCCTCATCTTGCAGCACTTGTTGGGAGGCATAGCCGAAAGCCATGGACAAAGTTCATCAATGTAGAAAATCAACACTTGGCTGTTCCTGAGGCTGTTGACTTTGTGGACAAGTTACTACGATATGATCACCAAGAACGTCCCACCGCAAAAGAAGCCATGGCCCATCCTTACTTCAATCCGGTCAGAAATGCAGAAAGTAGTAGAACTCGTACACATTGA 1281 0.4707 MVTEGPRNSLSLSPSPPPCLATHTSSSLSCALNLVPFPLPHRPEPFHSFSSSATWPHAPPAPLPHPPPPAAAAAVDTLAQKIGKSTRRPGASSKARVYADVNVVRPKEYWDYESFNVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIFELLKASALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMLAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELSAYLNKYHIELDPHLAALVGRHSRKPWTKFINVENQHLAVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPVRNAESSRTRTH* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1167 426 ProSiteProfiles Protein kinase domain profile. 125 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1167 426 Gene3D Transferase(Phosphotransferase) domain 1 202 412 - -
Dod05g1167 426 SUPERFAMILY Protein kinase-like (PK-like) 96 416 IPR011009 -
Dod05g1167 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Dod05g1167 426 Gene3D Phosphorylase Kinase; domain 1 125 201 - -
Dod05g1167 426 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Dod05g1167 426 Pfam Protein kinase domain 125 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1167 426 MobiDBLite consensus disorder prediction 406 426 - -
Dod05g1167 426 CDD STKc_CK2_alpha 106 412 IPR045216 GO:0004674|GO:0006468
Dod05g1167 426 MobiDBLite consensus disorder prediction 49 71 - -
Dod05g1167 426 SMART serkin_6 125 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1167 426 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Dod05g1167 426 MobiDBLite consensus disorder prediction 57 71 - -
Dod05g1167 426 PANTHER BNAA04G13490D PROTEIN 75 418 - -
Dod05g1167 426 PANTHER CASEIN KINASE II SUBUNIT ALPHA 75 418 IPR045216 GO:0004674|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1167 Dod-Chr5 32887580 32896909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1167 123 413 Core Cell Cycle Gene Families AT1G76540 30.380 2.64e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Dod05g1167 Pkinase 4.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1167 K03097 - gmx:100817795 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1167 05 32887580 32896909 Dod05g1167 05 32887580 32896909 ECH