Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1157 ATGTGCAAAAAGAACCCCTACAGACGCGTCACATATGCGCACGAACCAGCAGCGCCACTCTTCCGCTTCTTGCTAGTGTGCGCCCTAGTTGCGTTGCGTGCGCCAGTTGCGCAACACCCTAGCGTGCGCATCCCCACCCACCACATTCTCCAAACCAACGCAACCATCGTCGACCACCGCAGTTCCAGAACCAATAATCGCCACAGAGCTCAGATCTCGGGTTCCGATCGCCCACCCATGTCGAAGGCGCGTGTCTACACCGACGTCAACGTTCTCCGCCCCAAAGAGTACTGGGACTACGAGTCCCTCAACGTTCAATGGGGTGATCAGGATGATTATGAGGTTGTGCGAAAAGTTGGAAGGGGGAAGTATAGTGAGGTTTTTGAAGGCATAAATGTTAATAGCAATGAGCGCTGTATAATCAAGATTCTTAAGCCTGTCAAGAAGAAGAAGATAAAAAGAGAGATAAAAATACTTCAGAACCTTTGTGGGGGCCCAAATATTGTCAAGCTTCTTGATATTGTTAGAGATCAACACTCTAAAACTCCTAGCTTAATATTTGAGTATGTCAACAGTACAGATTTTAAAGTTTTGTATCCAACCTTGACTGATTATGACATACGCTATTACATATATGAGCTCCTTAAGGCCTTGGATTACTGCCATTCACAAGGCATAATGCATAGAGATGTCAAGCCTCATAATGTTATGATAGATCACGAGTTACGAAAACTTCGTCTGATAGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAGGAGTACAATGTTCGTGTAGCTTCAAGATACTTTAAGGGCCCTGAACTTCTGGTTGATCTACAAGACTATGACTACTCATTGGACATGTGGAGCCTTGGCTGCATGTTTGCTGGAATGATATTTCGCAAGGAGCCTTTCTTTTATGGTCATGACAACCATGATCAGCTTGTTAAAATAGCTAAGGTGCTTGGGACTGATGAACTGAATGCATATCTGAATAAGTATCATCTGGAGCTGGATCCTCAACTTGATGCGCTAGTTGGAAGGCACAGTCGCAAGCCCTGGTCTAAATTTATCAATGCAGATAATCAGCATCTTGTGTCTCCTGAGGCAATTGATTTTCTTGATAAGCTCCTTCGATATGATCACCAGGACAGGCTAACGGCAAGAGAAGCAATGGCACATCCATATTTCTCTCAGGTAAGGGCAGCAGAAAGTAGCAGAATGAGGATCCAGTAA 1239 0.4463 MCKKNPYRRVTYAHEPAAPLFRFLLVCALVALRAPVAQHPSVRIPTHHILQTNATIVDHRSSRTNNRHRAQISGSDRPPMSKARVYTDVNVLRPKEYWDYESLNVQWGDQDDYEVVRKVGRGKYSEVFEGINVNSNERCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNSTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDELNAYLNKYHLELDPQLDALVGRHSRKPWSKFINADNQHLVSPEAIDFLDKLLRYDHQDRLTAREAMAHPYFSQVRAAESSRMRIQ* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1157 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Dod05g1157 412 CDD STKc_CK2_alpha 94 398 IPR045216 GO:0004674|GO:0006468
Dod05g1157 412 PANTHER CASEIN KINASE II SUBUNIT ALPHA 16 412 IPR045216 GO:0004674|GO:0006468
Dod05g1157 412 Pfam Protein kinase domain 113 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1157 412 Gene3D Transferase(Phosphotransferase) domain 1 190 398 - -
Dod05g1157 412 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Dod05g1157 412 SUPERFAMILY Protein kinase-like (PK-like) 82 402 IPR011009 -
Dod05g1157 412 SMART serkin_6 113 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1157 412 MobiDBLite consensus disorder prediction 60 79 - -
Dod05g1157 412 Gene3D Phosphorylase Kinase; domain 1 113 189 - -
Dod05g1157 412 ProSiteProfiles Protein kinase domain profile. 113 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1157 412 PANTHER CASEIN KINASE II SUBUNIT ALPHA-3 16 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1157 Dod-Chr5 32365141 32370883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1157 111 398 Core Cell Cycle Gene Families AT1G76540 29.450 1.93e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Dod05g1157 Pkinase 1.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1157 K03097 - gmx:100819679 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1157 05 32365141 32370883 Dod05g1157 05 32365141 32370883 ECH
Dod02g0776 02 10077408 10082576 Dod05g1157 05 32365141 32370883 PCT