Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1140 ATGCCTCACAATGTATTCTTGCACTCTGCCCTTGTTCAATCAAGGCAGGTTGACCGCCGGAATAAAGGCCGAGTTCAAGAAGCCCTTAATTATTACTCAATAGAGTCCACCGTTGCCCTTATAGTCTCCTTTGTTATCAATATATTTGTCACAACTGTGTTCGCTAAGGGTTTCTATGGTACTGAACTAGCAAACAACATTGGCCTTGTAAATGCTGGACAGTATCTTCAGGAGAAATATGGGGGTGGACTATTTCCAATTTTATATATTTGGGGTATTGGGTTATTAGCAGCAGGCCAAAGTAGCACTGTTACCGGTACTTATGCGGGACAATTTATCATGGGAGGTTTTCTGAATTTAAGGTTAAAAAAATGGATGAGAGCGCTAATTACACGAAGTTTTGCAATAATCCCAACTATGATAGTTGCTCTTGTTTTTGATACCACTGAGGAATCATTAGATATTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTTCAAATCCCCTTTGCACTTATTCCCTTGCTTTGTTTGGTGTCAAAAGAACAGATAATGGGAAGTTTCAGAATTGGCCCCACCCTCAAGATTATTTCATGGCTCGTGGCTGCTCTGGTGATTGTGATTAATGGTTATCTTTTACTGGAATTCTTCTCCTCTGAAGTGAACGGGGCATTTTTTGGCGCTGTAGTCTGTGCAATAACTGCTGCATATGTTGTCTTCATAATTTACCTTGTTTCACGGGCCATTACCTTTTCACCCTGGCAACGTGTAACACAACCAAAGGCAATTGCTAACTCGGAGAGTTGA 807 0.4089 MPHNVFLHSALVQSRQVDRRNKGRVQEALNYYSIESTVALIVSFVINIFVTTVFAKGFYGTELANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTVTGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTMIVALVFDTTEESLDILNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGPTLKIISWLVAALVIVINGYLLLEFFSSEVNGAFFGAVVCAITAAYVVFIIYLVSRAITFSPWQRVTQPKAIANSES* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1140 268 Pfam Natural resistance-associated macrophage protein 1 191 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod05g1140 268 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 267 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod05g1140 268 PRINTS Natural resistance-associated macrophage protein signature 99 118 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod05g1140 268 PRINTS Natural resistance-associated macrophage protein signature 127 144 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod05g1140 268 PRINTS Natural resistance-associated macrophage protein signature 161 180 IPR001046 GO:0016020|GO:0030001|GO:0046873
Dod05g1140 268 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1140 Dod-Chr5 31977263 31979150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1140 1 254 Inorganic Solute Cotransporters AT2G23150 79.134 4.90e-148 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1140 K21398 - gmx:100807811 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1140 05 31977263 31979150 Dod05g1140 05 31977263 31979150 ECH
Dod02g0758 02 9898132 9901742 Dod05g1140 05 31977263 31979150 PCT