Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1127 ATGAGTAAGCTACAAAGTGATGCACTGAGAGAGGCGATTTCTCAAGTGGTTGCCAATGCAAACGAGAAGAAGCGGAATTTCACGGAGACCATTGAGCTGCAGATTGGGCTGAAGAACTATGATCCTCAGAAGGACAAGCGTTTCAGTGGCTCTGTCAAGCTCCCTCACATTCCTCGCCCTAAAATGAAGATCTGCATGCTTGGTGATGCTCAGCACGTCGAAGAGGCAGAAAAAATTGGGCTGGACTACATGGATGTGGAAGCGCTGAAAAAGCTTAACAAGAACAAGAAACTTGTGAAGAAGCTGGCCAAGAAGTACCATGCTTTTCTGGCTTCTGAAGCTGTCATCAAGCAAATTCCTCGTAAGTTTCCAACATTGGTGACACATCAGGAATCTCTGGAGTCAAAAGTCAATGAAACCAAAGCAATGGTGAAGTTTCAACTGAAGAAAGTTCTTTGTATGGGTGTTGCTGTTGGAAATTGCACAATGGAAGAGAAACAGATATTCCAAAACGTACAACTCAGTGTTAATTTCCTTGTTTCATTACTGAAGAAAAACTGGCAGAATGTGAGGTGCTTATACCTGAAGAGTACTATGGGAAGTGCGATCCGTGTATTTTAG 621 0.4316 MSKLQSDALREAISQVVANANEKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNCTMEEKQIFQNVQLSVNFLVSLLKKNWQNVRCLYLKSTMGSAIRVF* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1127 206 CDD Ribosomal_L1 9 205 IPR028364 -
Dod05g1127 206 Gene3D - 120 204 - -
Dod05g1127 206 Gene3D - 1 119 - -
Dod05g1127 206 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 1 206 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Dod05g1127 206 SUPERFAMILY Ribosomal protein L1 16 206 IPR023674 -
Dod05g1127 206 Pfam Ribosomal protein L1p/L10e family 23 200 IPR028364 -
Dod05g1127 206 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 2 204 - -
Dod05g1127 206 PANTHER 60S RIBOSOMAL PROTEIN L10A-3 2 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1127 Dod-Chr5 31565258 31567829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1127 1 206 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 83.333 7.57e-118 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1127 K02865 - gmx:100527763 366.311