Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1114 ATGGAATCAATTCCTTACTCAATCCCCTCTTCCAAATTCCATTCACTGGTTGTTTACAGAAAAGCCACGAGAACTCGATCCACCACCAACCTCGCTCTGCTCCCAACCTCAATCTCAATCAAACCCTTCTATTCCACCAAACCCCTCACCCTCCATCACCTTAGGCTTCGCTGTGTCGCTCAATCCAACGCAAATCACCACCACCACCACCACCACCACCACAACCATAGCCACAACCACCACGACCACGGCCATGACCACGACCACCATCACCATCACCGTCACCATCACCACTCGCACGGCATCGACGGTGCTAGCGTTACTGGTCCTCAACGAGCGGTCATCGGGTTCGCCAAAGTTACCAGATGGATGGACTTGGCAGATTTCCTGAGGGAGCACTTGCATCTTTGCTGCCTTTCCACCGCCTTATTCGTGGCCGCTGCCATTTGCCCTTACACCTTGCCAAAACCCCTCATTAAGCCCTTCCAAAACTCCCTCATTTACATTGCCTTTCCTTTGGTTGGGGTCTCTGCATCGCTTGATGCTCTTATAGAAATTAGTAGCGGAAAAGTGAACATCCATGTACTGATGGCAATGGCAGCCTTCGCATCTGTATTCATGGGAAACTCTTTGGAAGGAGGGTTACTTCTTGCTATGTTTAATCTTGCACATATAGCCGAGGAGCATTTCACGGGGCGATCGATGGTTGATGTTAACGAGTTGAAGGAGAACTATCCTGAGTTTGCACTTGTTCTTGATACCAGTGATGATAAGCTGCCTAATACATTTGACTTGGCGTACCAGAGGGTTCCAGTGCATGATGTAACTGTAGGATCATATATCCTTGTCGGTGCTGGTGAGTCTGTGCCTGTAGACTGTGAAGTTTTCCAAGGCAATGCCACAATTACCATCGAGCACTTGACAGGGGAAGTCAAACCATTGGAGGCCAAAGTTGGAGATAGGATTCCTGGTGGTGCAAGGAACTTAGATGGGAGGATAATTGTAAAGGTAACAAAGACATGGAAGGAATCAACACTCAATAGAATTGTGCAGTTGACTGAAGAAGCACAGTTGAATAAACCTAAACTTCAGAGGTGGTTGGATGAATTTGGTGAACGTTACAGCAAAGTTGTTGTGGTATTATCAGTTGCCATTGCTGTTATTGGGCCACTTGTATTTAAGTGGCCATTCATTAGTACACCCGCTTGCAGAGGTTCAGTTTATAGAGCCCTAGGGCTCATGGTGGCAGCATCACCATGTGCCTTGGCTGTGGCCCCATTAGCATATGCTACAGCAATCAGCTCCTGTGCAAAAAAGGGGATATTGCTCAAAGGTGGACATGTTCTGGATGCTCTAGCTTCTTGTCACACTATTGCATTTGACAAAACAGGGACTTTAACTACTGGTGGACTTGTATTCAAGGCAATCGAACCCATTTATGGTCATCATGTTAGAAACAATGAATCAAACATTTCTTCCTGTTGCATTCCTACCTGTGAAAAAGAAGCTCTTGCTGTTGCTGCAGCTATGGAAAAGGGTACTACTCATCCAATTGGAAGGGCTGTGGTTGACCACAGTGAAGGCAAAGACCTCCCATCTGTGTCTGTTGACAGTTTTGAGTACTTTCCTGGAAGAGGACTCGTTGCTATTGTTAACAGCATTGAGTCAGGAGCTGGAGGTGCTAAACAATTGAAGGCATCACTTGGGTCAGTAGATTTCATCACTTCATTTTGTCAATCTGAAGAGGAAACAAAAAGGATCAAGGAAGCCGTTGATACATCTACTTATGGGAGTGAATTTGTTCATGCTGCCCTTTCAGTGAATAAGAAGGTTACATTGATTCACCTAGAAGATAGACCTCGTCCTGGGGTTTTTCAGTGTCATTCAAGAATTGCAAAATGA 1902 0.459 MESIPYSIPSSKFHSLVVYRKATRTRSTTNLALLPTSISIKPFYSTKPLTLHHLRLRCVAQSNANHHHHHHHHHNHSHNHHDHGHDHDHHHHHRHHHHSHGIDGASVTGPQRAVIGFAKVTRWMDLADFLREHLHLCCLSTALFVAAAICPYTLPKPLIKPFQNSLIYIAFPLVGVSASLDALIEISSGKVNIHVLMAMAAFASVFMGNSLEGGLLLAMFNLAHIAEEHFTGRSMVDVNELKENYPEFALVLDTSDDKLPNTFDLAYQRVPVHDVTVGSYILVGAGESVPVDCEVFQGNATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRIIVKVTKTWKESTLNRIVQLTEEAQLNKPKLQRWLDEFGERYSKVVVVLSVAIAVIGPLVFKWPFISTPACRGSVYRALGLMVAASPCALAVAPLAYATAISSCAKKGILLKGGHVLDALASCHTIAFDKTGTLTTGGLVFKAIEPIYGHHVRNNESNISSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSVSVDSFEYFPGRGLVAIVNSIESGAGGAKQLKASLGSVDFITSFCQSEEETKRIKEAVDTSTYGSEFVHAALSVNKKVTLIHLEDRPRPGVFQCHSRIAK* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1114 633 Pfam haloacid dehalogenase-like hydrolase 457 588 - -
Dod05g1114 633 MobiDBLite consensus disorder prediction 64 107 - -
Dod05g1114 633 ProSitePatterns E1-E2 ATPases phosphorylation site. 461 467 IPR018303 -
Dod05g1114 633 Gene3D - 470 620 IPR023299 GO:0000166
Dod05g1114 633 MobiDBLite consensus disorder prediction 64 100 - -
Dod05g1114 633 SUPERFAMILY Calcium ATPase, transduction domain A 267 352 IPR008250 -
Dod05g1114 633 SUPERFAMILY Calcium ATPase, transmembrane domain M 195 453 IPR023298 -
Dod05g1114 633 Gene3D - 452 626 IPR023214 -
Dod05g1114 633 Pfam E1-E2 ATPase 266 439 - -
Dod05g1114 633 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 61 628 - -
Dod05g1114 633 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 461 571 IPR023299 GO:0000166
Dod05g1114 633 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 267 483 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod05g1114 633 Gene3D - 233 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1114 Dod-Chr5 31271267 31279874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1114 110 624 Primary Pumps ATPases AT4G37270 74.951 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1114 K01534 - gmx:100776309 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1114 05 31271267 31279874 Dod05g1114 05 31271267 31279874 ECH