Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1109 ATGAGCCACCCAAGTGTTGCTCTTCCCTCACGGTGGTCAATCACTTTATTCACTCTTCTTCTTATCGCTAACCAATGCTGTGGCCTAACCAGAGACGGCGTTTTGTTACTTTCCTTCAAGTACGCTGTGCTGAGCGACCCGCTGGCCGTGCTTGGGAGCTGGAACTACAGCAACGACACACCGTGTTCGTGGAACGGAGTCAGATGTTCGACCGTAACAAGTTCAACAAACGGTTCCCAATACCGCGTGACATCGTTGTCACTGCCGAATTCTCGGCTTCTCGGTTCGATCCCTTCTGATCTGGGTTCCATAGAGCACCTCCAAATTCTCGACCTTTCCAACAATTCACTTAATGGCACTCTCCCTCCTTCGCTCTTCCAAGCCTCGGAGCTTCGGTCACTTAACCTGTCCAACAACTTGATCACAGGGGAGGTTCCCAATTCCGTGGTTCAGCTTCGGAACCTTCAGTTCCTCAACCTCTCCGACAATGCCTTGGGGGGGAAAGTGCCCGACAACTTGTCCAACATGCAGAGCCTAACCGTTGCCTCTCTGAAGAGCAACTACTTTTCCGGTTTCCTTCCCAGCGGGTTGCGAACTCTGCAGTTTCTAGATCTGTCTTCCAACCTGCTGAATGGAACTCTGCCGCAAGATTTCGGTGGTGAGGCAATGCGTTACTTGAACATCTCCTACAACAGATTCTCAGGGGGAATCCCGGTCCAGTTCGCGGAAAAAATCCCGGGTAACTCGACGATTGACTTGTCGTATAACAATTTCACGGGCAAGATTCCGGACTCCCCTGCGCTTTTAAATCAGCGAACGACGTCGTTTTCAGGGAACGCTGATCTGTGCGGAGAACCGACCAAGAACCCGTGCCCCATTGCTTCTTCGCCTTCCTCCGAGCCAAGAGTGACTGCTCCGACTTCTCCCCCTGCAATCGCCGCGATTCCGAAGACGTTCGATTCTCCTCCTTTGGCGCCAACCGGTGTCGGTTCGTCTCAGCAGAAACAGCGCGGTGGGCTCAGGAGAGGAACGGTTATAGGAATCGCAGTGGGCGATGTCGTTGGCGTTGGGATCCTGGCCATGATTTTCTTCTACGTGTACCGGTTGAAGAGGAAGAAGGACGTGGAGAGTGCGATCAAGGACGAAGCCGCTGCGGCCAGAAGCGAGACCTCGTCGACAACTTCGGAGTCGAGAGGGTTCACGAGGTGGTCGTGCTTGCGCAAGAGAGTGGAAGACCAAGAGTCGTCTGAAACTACGAGCTCTTCTGAATTCGAAGCGGAACCACAAGACGGCCACAACCAGAAGGGTATTAATAATAACAATGAGAATCAGAGACAAAACGAAAGTTCGGGGCGGCAGCAGAACAAAACGGGTACTTTGGTTACTGTTGACGGAGAAAAGGAGCTTGAGATTGAAACGCTTTTGAAGGCCTCGGCGTACATATTGGGTGCCACTGGGTCCAGCATAATGTACAAGGCCGTGCTCGAGGACGGCACTTCGTTGGCGGTTCGCAGAATCGGTGAGAGTGGCGTTGAGAGGTTCAAGGACTTCGAGAACCAGGTTCGGGTCGTAGCGAAACTGGTGCACCCTAATTTGGTTCGCATTCGTGGGTTCTATTGGGGACATGACGAGAAGCTCATCATCTATGACTTCGTTCCTAATGGCAGCCTCGCCAACATTCGTTACAGGAAGGTGGGCTCTTCCCCTAGCCATTTACCATGGGAAATCCGGCTCAAAATAGCGAAAGGGGTGGCACGTGGGCTTGCATACCTCCACGAGAAGAAGCACGTGCATGGAAATTTGAAGCCTAGCAATATTCTATTGGGCAGCGACATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAGAATTGTAACGGGTGACACTAGTTATAAGGCAGGAGGATCCGCACGTATTTTTGGCAGCAAGAGATCCACGGCCTCACGTGAAAGTTTTACAGACATCACGTTTGGGCCTAGTCCAAGCCCGAGCCCAAGTTCGATAAGTGGTGTGTCTCCCTACCATGCTCCCGAGTCGCTCAGGAACCTCAAGCCTCACCCAAAGTGGGACGTGTACTCTTTTGGGGTTATGTTTCTTGAACTGCTATCGGGGAAGGTTGTAGTCTTGGATGACATGGGCCAAGGGCCCGGGGTTTTGGTTGAGGACAAGAACCGGGCCTTGCGGATGGCTGACGTGGCCATCCGTGCTGAGATGGAGGGTAAGGAGGAGGCCTTGTTGGCTTGCTTCAAATTAGGGTACAGTTGTGTGTCTAGTGTTCCACAGAAAAGGCCACCGATGAAAGAGGTGCTACAAGTTCTTGAAAAGATACCATCGTCGTCGTCTTCTTTGTCATATTGTTACAGCCACTGA 2370 0.5224 MSHPSVALPSRWSITLFTLLLIANQCCGLTRDGVLLLSFKYAVLSDPLAVLGSWNYSNDTPCSWNGVRCSTVTSSTNGSQYRVTSLSLPNSRLLGSIPSDLGSIEHLQILDLSNNSLNGTLPPSLFQASELRSLNLSNNLITGEVPNSVVQLRNLQFLNLSDNALGGKVPDNLSNMQSLTVASLKSNYFSGFLPSGLRTLQFLDLSSNLLNGTLPQDFGGEAMRYLNISYNRFSGGIPVQFAEKIPGNSTIDLSYNNFTGKIPDSPALLNQRTTSFSGNADLCGEPTKNPCPIASSPSSEPRVTAPTSPPAIAAIPKTFDSPPLAPTGVGSSQQKQRGGLRRGTVIGIAVGDVVGVGILAMIFFYVYRLKRKKDVESAIKDEAAAARSETSSTTSESRGFTRWSCLRKRVEDQESSETTSSSEFEAEPQDGHNQKGINNNNENQRQNESSGRQQNKTGTLVTVDGEKELEIETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRVVAKLVHPNLVRIRGFYWGHDEKLIIYDFVPNGSLANIRYRKVGSSPSHLPWEIRLKIAKGVARGLAYLHEKKHVHGNLKPSNILLGSDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRESFTDITFGPSPSPSPSSISGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLSGKVVVLDDMGQGPGVLVEDKNRALRMADVAIRAEMEGKEEALLACFKLGYSCVSSVPQKRPPMKEVLQVLEKIPSSSSSLSYCYSH* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1109 789 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 779 - -
Dod05g1109 789 SUPERFAMILY Protein kinase-like (PK-like) 481 777 IPR011009 -
Dod05g1109 789 Gene3D Phosphorylase Kinase; domain 1 437 551 - -
Dod05g1109 789 SMART LRR_typ_2 104 128 IPR003591 -
Dod05g1109 789 SMART LRR_typ_2 197 220 IPR003591 -
Dod05g1109 789 SMART LRR_typ_2 152 176 IPR003591 -
Dod05g1109 789 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Dod05g1109 789 CDD STKc_IRAK 482 776 - -
Dod05g1109 789 Gene3D Transferase(Phosphotransferase) domain 1 552 785 - -
Dod05g1109 789 MobiDBLite consensus disorder prediction 325 339 - -
Dod05g1109 789 Pfam Leucine rich repeat 106 165 IPR001611 GO:0005515
Dod05g1109 789 PRINTS Leucine-rich repeat signature 107 120 - -
Dod05g1109 789 PRINTS Leucine-rich repeat signature 152 165 - -
Dod05g1109 789 Pfam Protein kinase domain 482 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1109 789 ProSiteProfiles Protein kinase domain profile. 476 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1109 789 MobiDBLite consensus disorder prediction 409 461 - -
Dod05g1109 789 MobiDBLite consensus disorder prediction 651 674 - -
Dod05g1109 789 MobiDBLite consensus disorder prediction 651 673 - -
Dod05g1109 789 Gene3D Ribonuclease Inhibitor 30 196 IPR032675 -
Dod05g1109 789 MobiDBLite consensus disorder prediction 287 340 - -
Dod05g1109 789 PANTHER BNAC07G16060D PROTEIN 5 779 - -
Dod05g1109 789 SUPERFAMILY L domain-like 32 286 - -
Dod05g1109 789 Gene3D Ribonuclease Inhibitor 197 293 IPR032675 -
Dod05g1109 789 MobiDBLite consensus disorder prediction 417 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1109 Dod-Chr5 30963134 30966807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1109 28 789 Receptor kinase-like Gene Family AT4G37250 58.259 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod05g1109 Pkinase 4.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1109 - - ahf:112799685 1193.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1109 05 30963134 30966807 Dod05g1109 05 30963134 30966807 ECH