Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1104 ATGTATGATGTTTTGCTAGGGACTAAGGGGACTATCATAAAGAGGATGATAGCTATTAAAGAGAAGGCTAGTATGGATGTGCTTTGCAGTGATAAAACTGGGACTCTAACCATAAATAAGCTAAATGTTGACAAAAATCTTATTGAGGTTTTTGCAAAAGGAATGGATCCAAATATTGTTGTTTTGATGGCAGCTCGAGCCTCAAGACTTGAGAATCAAGATGCAATAGATTCTGCCATAGTTGAGATGCTGGCTGATCCGAAGGAGGAGTGTTTGGCCCGGTCTAGGCCCAGTGTGTACCCGGTCTTAATCCGGCCCGAACATGATCGGGTTTACTCGGGTCTAGGGTCAGGTCACATTAGTCCCTGA 369 0.4363 MYDVLLGTKGTIIKRMIAIKEKASMDVLCSDKTGTLTINKLNVDKNLIEVFAKGMDPNIVVLMAARASRLENQDAIDSAIVEMLADPKEECLARSRPSVYPVLIRPEHDRVYSGLGSGHISP* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1104 122 Gene3D - 6 25 - -
Dod05g1104 122 ProSitePatterns E1-E2 ATPases phosphorylation site. 31 37 IPR018303 -
Dod05g1104 122 PANTHER CALCIUM-TRANSPORTING ATPASE 6 90 - -
Dod05g1104 122 Gene3D - 26 40 IPR023214 -
Dod05g1104 122 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 6 90 - -
Dod05g1104 122 Gene3D - 41 90 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1104 Dod-Chr5 30656873 30658505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1104 6 89 Primary Pumps ATPases AT5G62670 77.381 3.93e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1104 K01535 - tcc:18601432 132.109