Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1102 ATGGATGAAAAGATTGACACCGCTGACAAAAAGGTGCTGGTTGATATTGTAAAATTGGTACAAAAGAGAGCTCTGAAGGGTGAATTGGGAGACTGGAAAGAATTCTTGAACAGTAATGATAAAAAGTTTGGGGCAGGTTTGAGTGACCCAGCAAAGAGGTCCCATGAGATATTGGCTGCATTTTTAAAGACATTTTCGAAGGAGGATGATTTGAAGTTTTTTGCCAACATCATGCGACATCATTCAAATCAAAACTTACTGGTGCAATTGAAAGATAAATCTCATGATTCCCCTGAGCAGAGGCTAGTCCAAGTAACTCTCCAGCACCCCTTGTATCCAATTGATTATTCATTTCCATCAATTGATGAGGGATGGATAATTATAAACCTTAAAAAGAAAGCAAAGGTGATGAAATCTACTTCTATGGTTGCTGTTGATTGTGAAATGGTTCTCTGTGAAGATGGGACTGAAGCATTAGTGAAAGTATGCGTGGTAGATCACAATTTAGAGGTCAAACTAAACGAACTTGTGAAACCCAACAAAGCAATTGTAGACTACAGGACAGAGATTACTGGTGTCTCTCCTCAAGATCTAGAGGCAGCCACTTGCACCTTGTCTGATATACAGAAATCCATGAAGAAGTTGCTATCCAATGGAACCATATTAGTGGGACACAGTTTGCATAATGATCTACGTGTGCTGAAGCTAGATCATGTTAGAGTGGTTGACACTGCATATATCTTCCAATCCCCAGATGGATTAATTCACAAGAGACCTTCTTTAAATAATTTATGCAAGGCTGTGTTAGGGTATGAAGTTCGGGAAGATGGAGCTCCACATAATTGTCTAGATGATGCAACTGCAGCAATGAAACTTGTTCTTGCAAAGATCAGGCATGGTGTTGACCGAGCATTTCCGTTGGTTCAAGAGCCTGTTTCTGAAAGTGAGACGGCAAAGCTTCTTCTTCACAGGATACCATCCACTGTGAACATTGAAACACTACATAAAGTTGTTCCTGGAGACTTCACAATAGAACTGAAGCCTTCCAGGAAAGGACGAGGAGAAAAATATTCTGCCTTAGCTATCTTTAAGAACCCACAAGAGGCACATGATGCCTATGAAAATGTTGAAGGCAGCCAATTAAAGGATTCAAATGGGATTCCACAGAAGCTCATCGAATTTCAGCTAAGTGCGGGCACAACTGCCAGTTTATTTGTTCGGAAAATGACAACAGATGTGCCACGTGACCAGATTCCATCGAAGAGAGGCTTACAAACAGACGAGGAAGTTCATGGTTCGAAGAAAGCAAAGATGGATACTAAAATTGAAGATGCCCGGGGAGTCTCAAGTAACTGTTTGAAAGAGAATGAAGAACTGAATCAACGATTGAAGCAAAGTGAGTTGGAGATCGAAAATCTGAGGGAACAACTGAGACAAAAGGATGTTGACATTGATTCTATGAGGGAACAGTTGAGACAGAAGGATTTTGACATCTCCATGCTACATAAAATGATAGCCTCCTTAAAAAAGCGGCAAAACTAA 1542 0.4047 MDEKIDTADKKVLVDIVKLVQKRALKGELGDWKEFLNSNDKKFGAGLSDPAKRSHEILAAFLKTFSKEDDLKFFANIMRHHSNQNLLVQLKDKSHDSPEQRLVQVTLQHPLYPIDYSFPSIDEGWIIINLKKKAKVMKSTSMVAVDCEMVLCEDGTEALVKVCVVDHNLEVKLNELVKPNKAIVDYRTEITGVSPQDLEAATCTLSDIQKSMKKLLSNGTILVGHSLHNDLRVLKLDHVRVVDTAYIFQSPDGLIHKRPSLNNLCKAVLGYEVREDGAPHNCLDDATAAMKLVLAKIRHGVDRAFPLVQEPVSESETAKLLLHRIPSTVNIETLHKVVPGDFTIELKPSRKGRGEKYSALAIFKNPQEAHDAYENVEGSQLKDSNGIPQKLIEFQLSAGTTASLFVRKMTTDVPRDQIPSKRGLQTDEEVHGSKKAKMDTKIEDARGVSSNCLKENEELNQRLKQSELEIENLREQLRQKDVDIDSMREQLRQKDFDISMLHKMIASLKKRQN* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1102 513 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 1 412 - -
Dod05g1102 513 Coils Coil 449 490 - -
Dod05g1102 513 PANTHER SMALL RNA DEGRADING NUCLEASE 1-RELATED 1 412 - -
Dod05g1102 513 CDD REX1_like 143 294 IPR034922 -
Dod05g1102 513 Gene3D - 137 307 IPR036397 GO:0003676
Dod05g1102 513 SMART exoiiiendus 141 302 IPR013520 -
Dod05g1102 513 Pfam Exonuclease 143 292 IPR013520 -
Dod05g1102 513 SUPERFAMILY Ribonuclease H-like 142 297 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1102 Dod-Chr5 30647485 30654126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1102 118 315 C2H2 Transcription Factor Family AT3G27970 29.075 2.77e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1102 K14570 - gmx:100785565 742.651