Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1071 ATGGCATTCGTGCGAGTCATCTCCACCAGCACAGTACAAGCACCGAGTCAAGATGATGGTCACTCAACTCCGAAATTCCATTTAACCCCATGGGATCTCCATTTCCTCCCAATTGGAGCCATCCAAAAAGGCCTTCTATTTCGCAACCCAACCGAAGAAAACATATTAACCCAGATCCGACACCTGAAGCACTCCTTTTCCACCACTCTCGCCTTCTTTCCACCCCTTACAGGCCGTTTAGCCATCATCCAAAACGAAGACAGCACTGCCTCTTGTTACATCTTGTGCAACAACGAAGGAGCACTCTTTGTCCACGCGGTAGCAGAGAGCACCCGTGTCGCTGACATCCTTCAACCCAAGTACGTTCCCCCCATCGTCCACTCCTTCTTCCCACTCAACGGAGTTCAAAACCACCTAGGCACTTCACAGCCGCTGCTAGCGGTGCAAGTCACGGAGCTAGTTGACGGCATCTTCATTGGCTGCACACTCAACCACGTGGCCGGTGACGGCGCTTCGTTTTGGCATTTCATGAACTCTTGGGCTGAAATCTCACGTGGCTGCCACAAACCATCAAAACTCCCTTCCCTGGAACGCTGGTTTCTCGACGGTATTGAACCTCCCATACGCTTCCCTCTCACAAAGGAAGACGTTGAATGCCCCAAGCCACAACCTCCACCGCTGGAAAGGTTTTTCCATTTCACAAAGGAGAAGATCGCGCAACTCAAAGCAACAGCCAATGCGGAGGCCAACACAGAGAAGATATCCTCGCTCCAATCGCTTTTAACTCATCTTTGGCGATCTGTGATCCGTTGCAATCGTGTTGACTCGCAAGAAGAGGTCTCTTACTTCTTTTTGGCGGGCGTTAGGCCGAGGATGATTCCGCCGTTGCCAGAGGGTTACTTTGGGAACGCGGCGATGATTGGCGGCGTCACCATGAGAGCAGGGGAACTGCTGGAAGGTGGGCTTGGGAAGGGGGCGTGGGAGATGAACAAGATGATAGGTTCGTACTCCGATGAGAAGGTGAGTCGCCACTATGAATCTTGGGTGAAAACCCCAACTCTGTTTAAGATGGGTAGCGTGCTTAGTAGTAATTTCTTGGCCAATAGCAGTTCCCCACGGTTTGATGTTTACGGTAATAACTTTGGGTGGGGAGAGCCTGTGGCGGTTCGAAGTGGCTGTGCAAATAAAGGTAGCGGGAAGATTTCTTTGTTTCCTGGGGCAGAAGAAGGTAGTATTGACATTGAAGTGTGCCTGCCTTGTGAGATTTTGGAGGCCTTAGTAAATGACCATGAGTTTATGGATGCTGTTTCCATCTAA 1317 0.5072 MAFVRVISTSTVQAPSQDDGHSTPKFHLTPWDLHFLPIGAIQKGLLFRNPTEENILTQIRHLKHSFSTTLAFFPPLTGRLAIIQNEDSTASCYILCNNEGALFVHAVAESTRVADILQPKYVPPIVHSFFPLNGVQNHLGTSQPLLAVQVTELVDGIFIGCTLNHVAGDGASFWHFMNSWAEISRGCHKPSKLPSLERWFLDGIEPPIRFPLTKEDVECPKPQPPPLERFFHFTKEKIAQLKATANAEANTEKISSLQSLLTHLWRSVIRCNRVDSQEEVSYFFLAGVRPRMIPPLPEGYFGNAAMIGGVTMRAGELLEGGLGKGAWEMNKMIGSYSDEKVSRHYESWVKTPTLFKMGSVLSSNFLANSSSPRFDVYGNNFGWGEPVAVRSGCANKGSGKISLFPGAEEGSIDIEVCLPCEILEALVNDHEFMDAVSI* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1071 438 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 435 - -
Dod05g1071 438 Gene3D - 2 207 IPR023213 -
Dod05g1071 438 Pfam Transferase family 5 433 - -
Dod05g1071 438 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 435 - -
Dod05g1071 438 Gene3D - 213 428 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1071 Dod-Chr5 29380466 29414971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1071 45 424 Monolignol Biosynthesis Gene Families AT5G48930 26.119 4.05e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1071 - - adu:107480292 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1071 05 29380466 29414971 Dod05g1071 05 29380466 29414971 ECH