Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1060 ATGGATTGGGTACGAGGAGACGCAGTTGGTAGAGGAAGCTTCGCCACGGTGAGTTTAGCAATACCGAGAACCGGTTCCACCCAGTTCCCCTCCCCGACCGCTGTCAAGTCCTCCGAGGTTGTCACCTCGTGCTGGCTCAAGAACGAAAAGCACGTGCTCGATCGCCTAGGCACGTGCCCAAGAATCATCCGGTGTTACGGCGAAGACTACAGCATCGAGAACGGCAACGAGTACTACAACCTCTTCCTCGAGTACGCCGGCGGCGGTAGCCTCTCCGACCAGCTTCGCTTCCATGGCGGCCGGATTCCGGAACTCCAAGCTCGGCGCTACACGAAATCAATCGTCCAGGGACTCAGGCACATTCACGAGAACGGGTTCGTGCACTGCGACATAAAGCTGCAGAACATCCTCGTGTTCGAGGACGGAGAGGTTAAGATTGCTGATTTCGGGCTCGCAAAGGAGGCAGGGGAGGGAATTGGGAAGAAGAGGTTTGAGTGCAGGGGGACTCCGCTGTGCATGTCGCCAGAATCGGTTAACGACGGCGAGTGTGAGTCGCCGGCGGATATATGGGCCCTGGGGTGCGCGGTGGTGGAGATGGTGACGGGTAAGCCCGCGTGGAACGTTCAGAGGGATTCGAGCATTTGGTCTTTGTTGCTTCGAATTGGGGTGGGAGAGGAAGTGCCTTTGATCCCTGATGAGATTTCGCAAGAAGGGAAGGATTTCTTGGGGAAGTGTTTTGCGAAAGACCCAAGGAAGCGATGGACGGCTGAGATGCTTCTGAGGCATCCTTTTATTGCCGGTGACACTGTTCCATTGAAGGGTGTGAGTGAGCCTTCGCCCTCGCCAAGGAGCCACTTCGATTTCCCTGATTGGGTTTCCAGTGTCAACGGTTCTGTTCCGAGCTCACCTGAATCCGGTGAGCCGAGTGAATGGAATTTTGGTTCGTCGTGTTTGTCTTTCGCCGGCGGATCGGCTCTTGCGGATCTTGACGGATCAGTTGCCGGCGAATTGGCGGGAATCGGAAAGTTGGACTAG 1035 0.5614 MDWVRGDAVGRGSFATVSLAIPRTGSTQFPSPTAVKSSEVVTSCWLKNEKHVLDRLGTCPRIIRCYGEDYSIENGNEYYNLFLEYAGGGSLSDQLRFHGGRIPELQARRYTKSIVQGLRHIHENGFVHCDIKLQNILVFEDGEVKIADFGLAKEAGEGIGKKRFECRGTPLCMSPESVNDGECESPADIWALGCAVVEMVTGKPAWNVQRDSSIWSLLLRIGVGEEVPLIPDEISQEGKDFLGKCFAKDPRKRWTAEMLLRHPFIAGDTVPLKGVSEPSPSPRSHFDFPDWVSSVNGSVPSSPESGEPSEWNFGSSCLSFAGGSALADLDGSVAGELAGIGKLD* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1060 344 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 307 - -
Dod05g1060 344 ProSiteProfiles Protein kinase domain profile. 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1060 344 Pfam Protein kinase domain 6 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1060 344 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 307 - -
Dod05g1060 344 Gene3D Transferase(Phosphotransferase) domain 1 92 284 - -
Dod05g1060 344 SUPERFAMILY Protein kinase-like (PK-like) 3 304 IPR011009 -
Dod05g1060 344 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Dod05g1060 344 SMART serkin_6 3 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1060 344 CDD STKc_MAPKKK 2 265 - -
Dod05g1060 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Dod05g1060 344 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1060 Dod-Chr5 28382603 28384062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1060 1 310 MAP Kinase Kinase Kinase AT4G36950 56.962 2.84e-117 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod05g1060 Pkinase 4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1060 - - aprc:113858661 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1060 05 28382603 28384062 Dod05g1060 05 28382603 28384062 ECH
Dod02g0710 02 9256713 9258337 Dod05g1060 05 28382603 28384062 PCT