Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod05g1058 | ATGGAGGTGGACACAGTAAAAACTTCGGCCTGTGACACCAGCAGCATGGACACGATGGCAGTGGTGATGATGCAAATGGAAAAGTTCTCTGAATTCTGTGAAGCTTTTTGTAACACCACCCTTATCACCACTTACCAAGAAAACGAGTCCTCGGGTAGAAGCTCAAGCTCCATCACCACCGTTCCCATATTCAATGTGGCACCACCGTGTTTGATTGATTCACCACCGTCCAATGTCAATTTCCCTATCCAACAACAACAACCACCCATGACGCCACCCCTTCAACAACCCAACTTTGTTAACCCCAATAATTCATTTCTTTATGCACCATCATCGAAGCGGAGTTCCATGGCAGCCATGAGGGAAATGATCTTCCAAATAGCGGTGATGCAACCGATTCACATAGACCCGGAATCAATCAAGCCACCGAAGCGCAGGAACGTGAAGATCTCCAAGGACCCGCAGAGTGTGGCGGCGAGGCACAGAAGGGAGAGGATCGGCGAGAGGATAAGGATCCTGCAGAGATTAGTCCCTGGTGGAACCAAAATGGACACTGCTTCTATGTTAGACGAGGCAGCGCATTACGTGAAGTTCTTGAAGAAACAGGTGCAAACGCTGGAACAAGCAGGGGCAAGTAGACCCCTTGGTGGTGGTGGTGGCTTATTCCCTGGAGGGATTTCCGGTGCCAATGTTAGTGATTCTGCTCTGTTGATGAAGGGTTGCCAACAACCTTGTCATATGGTGAAACGAAATGGGTTCTGTGGTTGTTTAGTGTTAATTGGTCCATCGTTTGGTGGGTCGTGA | 804 | 0.49 | MEVDTVKTSACDTSSMDTMAVVMMQMEKFSEFCEAFCNTTLITTYQENESSGRSSSSITTVPIFNVAPPCLIDSPPSNVNFPIQQQQPPMTPPLQQPNFVNPNNSFLYAPSSKRSSMAAMREMIFQIAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERIGERIRILQRLVPGGTKMDTASMLDEAAHYVKFLKKQVQTLEQAGASRPLGGGGGLFPGGISGANVSDSALLMKGCQQPCHMVKRNGFCGCLVLIGPSFGGS* | 268 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod05g1058 | 267 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 150 | 199 | IPR011598 | GO:0046983 | |
Dod05g1058 | 267 | Gene3D | - | 149 | 213 | IPR036638 | GO:0046983 | |
Dod05g1058 | 267 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 1 | 246 | IPR045843 | GO:0003700|GO:0006355 | |
Dod05g1058 | 267 | Coils | Coil | 189 | 209 | - | - | |
Dod05g1058 | 267 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 154 | 209 | IPR036638 | GO:0046983 | |
Dod05g1058 | 267 | PANTHER | TRANSCRIPTION FACTOR HEC2 | 1 | 246 | - | - | |
Dod05g1058 | 267 | CDD | bHLH_AtIND_like | 151 | 207 | - | - | |
Dod05g1058 | 267 | Pfam | Helix-loop-helix DNA-binding domain | 160 | 199 | IPR011598 | GO:0046983 | |
Dod05g1058 | 267 | SMART | finulus | 156 | 205 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod05g1058 | Dod-Chr5 | 28233532 | 28234858 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod05g1058 | 76 | 225 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G50330 | 62.346 | 3.82e-50 | 163 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Dod05g1058 | HLH | 4.7e-05 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod05g1058 | - | - | gmx:100805427 | 235.343 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod05g1058 | 05 | 28233532 | 28234858 | Dod05g1058 | 05 | 28233532 | 28234858 | ECH |