Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1055 ATGATTCACGTTTTGTTCCTTTTTTTAATATATATTCCTTTTCCTTCCCCACACCTACCCACCCACTCTCCCCCTTCCCCTTGCCCTTCACATTCTTTTGGTGCTCTTTATAACGTGACAAGGGAACACAACAGCAGTATCCTTCAGTTTGCGGATAATCTTGCTCCTTGCTACTTTGAATTAGCCATGGCATCCGATTGCAACAAGAGCTTCGCAGACAGTTACATGTTGTTAAAACATGAAGATGCCCATTTCTTTGATCTCCTTCATGTCTTGTTTTCCCGAAACGTGGGAAAAAGAAAGTTTGTCGAAAGCCATTCAGGGGGTGAGTTGGAAGAAAGCTTCGGCCACCGCTGGCTTATATTTATATCTATCTTGGGTCAGAAGCTCTTGCAGCTTGTGGCCAAGCCATTAGCATTCTTTGGGACTTGCGTTGAGCTCCTGATCAACCTGGTTATCGTCAACGGTGGTTTATTCATGCTCATACTTAACTTTCTCAAGGGTAAGATGGTCTTGCCCGATCCTAAATCGCCAAAGTATCTGTCTTGTATTGGAAACTTAGACGCGAGAGTAAAGTTGGATGCCGTTAAACGTGATGATTACAAATATTATGTTGCACTTTCAATGATGGCTTCAAAAGCATCCTATGAAAATGAAGCTTTCCTTAAAACTACTGTTGAAGATCAATGGAAGATGAAATTTGTGGGATTTTATGACTGCTGGAATGAGTATCTAGGAAAGACCACTACTCAAGTCTTGGTTGTTTTGGATAAATACGAGGACCGTGATACTTATGTAGTGGCCTTCAGAGGAACGGAACCTTTTAATGCTGATGATTGGTGCACTGATATTGACATCTCGTGGTATGGAATTCCTGGCGTTGGAAGAATGCACGGCGGCTTTATGAAAGCATTAGGGCTGCAGAAGAATGTGGGATGGCCGCCCAAGGAAATTGAACGGGATCAGGGTCTTCCACCACTAGCCTACTATGTCGTTAGGAACATTCTAAGAAAAGGGTTGAGTGAAAATAATAAAGCAAAGTTTATAGTTACGGGCCACAGTTTAGGTGGAGCACTCGCAATCCTCTTTGGGACGATATTGTTTTTGCACGATGAGACATTGCTGTTGGAGAGGCTGGAAGGGATCTACACGTTTGGGCAACCAAGAGTCGGAGATGAAGTATATGCAAGCTATATGAGGAAAAAGTTGAAGGAGCATTCTGTCCGGTACAGCAGGTTTGTTTACAACAATGACATAGTTCCAAGGTTGCCGTACGATGACAAGGAAATGATGTTCAAGCACTTTGGCACATGTCTTTTCTTTAACTGGCGCTACAAACTCCAGATTCTTGAAGACGAACCGAATAAGAACTACTTTTCGCCCTGGTGCCTGATACCCATGACGGTGCAAGCAATTTTGGAACTAATAAGGAGCTTCACTATTGCGTACCTAAGAGGACCTCACTACAGAGAAGGATGGCTTCTCTTTGCTTTCAGGACTATGGGCATAATAATTCCTGGATTACCTGCTCATGGTCCCCAGGATTATCTTAATTCCACTCTTTTGGGATCAATTGAAAATCATTTCAAAGAGGAGTAA 1599 0.4284 MIHVLFLFLIYIPFPSPHLPTHSPPSPCPSHSFGALYNVTREHNSSILQFADNLAPCYFELAMASDCNKSFADSYMLLKHEDAHFFDLLHVLFSRNVGKRKFVESHSGGELEESFGHRWLIFISILGQKLLQLVAKPLAFFGTCVELLINLVIVNGGLFMLILNFLKGKMVLPDPKSPKYLSCIGNLDARVKLDAVKRDDYKYYVALSMMASKASYENEAFLKTTVEDQWKMKFVGFYDCWNEYLGKTTTQVLVVLDKYEDRDTYVVAFRGTEPFNADDWCTDIDISWYGIPGVGRMHGGFMKALGLQKNVGWPPKEIERDQGLPPLAYYVVRNILRKGLSENNKAKFIVTGHSLGGALAILFGTILFLHDETLLLERLEGIYTFGQPRVGDEVYASYMRKKLKEHSVRYSRFVYNNDIVPRLPYDDKEMMFKHFGTCLFFNWRYKLQILEDEPNKNYFSPWCLIPMTVQAILELIRSFTIAYLRGPHYREGWLLFAFRTMGIIIPGLPAHGPQDYLNSTLLGSIENHFKEE* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1055 532 SUPERFAMILY alpha/beta-Hydrolases 203 445 IPR029058 -
Dod05g1055 532 Gene3D alpha/beta hydrolase 193 462 IPR029058 -
Dod05g1055 532 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 65 532 IPR044819 GO:0004806|GO:0006629
Dod05g1055 532 Pfam Lipase (class 3) 266 427 IPR002921 GO:0006629
Dod05g1055 532 CDD Lipase_3 202 442 - -
Dod05g1055 532 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 65 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1055 Dod-Chr5 28054288 28060744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1055 75 522 Acyl Lipid Metabolism Gene Families AT5G67050 48.802 8.82e-156 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod05g1055 Lipase_3 8.9e-37 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1055 - - gmx:100795779 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1055 05 28054288 28060744 Dod05g1055 05 28054288 28060744 ECH
Dod02g0705 02 9182329 9188481 Dod05g1055 05 28054288 28060744 PCT