Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1054 ATGGCATCCGATTGCAACAAGGGCTTCGCAGACAGTTACATGTTGTTAAAACACGAAGATGCCCATTTCTTTGATCTCCTTCATGTCTTGACTTCCCGAAACGTGGCAAGGAGAAAGTTTGTGGAAAGCCACGCAGAGGGCGAGTTTGATGAAAGTTTGGGGCACAGACGGCTTATATTTATCTCTATCTTGATCCAGAAGCTCCTGCAGCTTGTGGCCAAGCCATTAGCATTCTTTGGGACTTGCATTGAGCTTTTGATCAACTTAGTTGCCCTCAACGGCGGTATATTCAGGGTCATGCTTAACTTCCTCAGGGGTAAGTTGGTCTTACCTGATCGTCAATCCGCAAACTATTTGTCATGCATTGGGAATTTGGATGTACGAGTAAAGTTGGATGCCACCAAGCGAGAAGATAACAAGTATTATGTTGCACTTTCTATGATGGCCGCAAAAGCATCCTATGAGAACGCAGCTTATATTAAAACTACTGTCGAAGATCATTGGAAGATGGAATTTGTGGGGTTTTATGACTGCTGGAATGAATATCAAGGAAAGGCCTCAACTCAAGTCCTGATTGCATTGGATAAACACGAGCACCGTGATACTTATGTAGTCGCCTTTAGAGGAACGGAACTGTTTAATGCTAATGATTGGTGCACTGATTTTGACATCTCGTGGTATGGAATTCCTGGCGTTGGAAGAATGCATGGTGGCTTTATGAAAGCATTAGGTCTACAGAAGAATGTGGGATGGCCTAAGGAAATTGAAAGGGATGAGAGTCTTCCACCACTAGCCTACTATGTCGTTAGGGACATTCTAAGAAAAGGATTGGGTGAAAGTGATAAAGCAAACTTTATAGTGACAGGCCACAGTTTGGGTGGGGCACTGGCAATCCTCTTTGGGACGATCTTGCTTTTGCATGGCGAGGCATTGTTATTGGAGAGGCTGGAAGGGATCTACACGTTTGGGCAACCAAGAGTTGGAGATGAAGCCTATGCAAGGTACATGAAACAAAAATTGAAGAATCATTCTGTCAGGTTTTACAGGTTTGTTTACTGCAACGACATAGTTCCAAGGTTGCCCTATGATGACAAGGAAATGATGTTCAAGCATTTTGGCACATGTCTTTTCTTTAACTGGCGTTACGAACCAAAGGTTCTTGAAGAAGAACCGAATAAGAACTACTTCTCGCTCTGGTGCGTGATTCCCATGACAGTGAACGCAATTTTGGAACTAATAAGGAGCTTCACTATCGTGTACCAAAATGGACCTCACTACAGAGAAGGATGGCTTCTCTTTGCCTTCAGGATTATTGGCCTGGTATTTCCCGGGTTACCTGCTCACTGTCCCCAAGATTACGTTAATTCCACTCTGTTGGGATCTATTGAAAGACACTTGAAAGTAGAGTGA 1410 0.4362 MASDCNKGFADSYMLLKHEDAHFFDLLHVLTSRNVARRKFVESHAEGEFDESLGHRRLIFISILIQKLLQLVAKPLAFFGTCIELLINLVALNGGIFRVMLNFLRGKLVLPDRQSANYLSCIGNLDVRVKLDATKREDNKYYVALSMMAAKASYENAAYIKTTVEDHWKMEFVGFYDCWNEYQGKASTQVLIALDKHEHRDTYVVAFRGTELFNANDWCTDFDISWYGIPGVGRMHGGFMKALGLQKNVGWPKEIERDESLPPLAYYVVRDILRKGLGESDKANFIVTGHSLGGALAILFGTILLLHGEALLLERLEGIYTFGQPRVGDEAYARYMKQKLKNHSVRFYRFVYCNDIVPRLPYDDKEMMFKHFGTCLFFNWRYEPKVLEEEPNKNYFSLWCVIPMTVNAILELIRSFTIVYQNGPHYREGWLLFAFRIIGLVFPGLPAHCPQDYVNSTLLGSIERHLKVE* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1054 469 CDD Lipase_3 139 379 - -
Dod05g1054 469 Gene3D alpha/beta hydrolase 123 411 IPR029058 -
Dod05g1054 469 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 3 469 - -
Dod05g1054 469 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 469 IPR044819 GO:0004806|GO:0006629
Dod05g1054 469 Pfam Lipase (class 3) 204 364 IPR002921 GO:0006629
Dod05g1054 469 SUPERFAMILY alpha/beta-Hydrolases 138 387 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1054 Dod-Chr5 27915694 27932614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1054 13 459 Acyl Lipid Metabolism Gene Families AT5G67050 50.219 2.50e-162 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod05g1054 Lipase_3 1.6e-37 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1054 - - gmx:100795779 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1054 05 27915694 27932614 Dod05g1054 05 27915694 27932614 ECH