Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1051 ATGATCCTGCCACCAATGACTGTCGTATCGTGGAGCGAAAGTGGCAACACTTTTGTGGTGTGGAAACATGCGGATTTCGCTAAGGATTTGCTTCCAAAGTACTTTAAGCACAACAATTTCTCCAGCTTCGTCAGACAGCTCAATACCTATGGATTCCGAAAGATCGTTCCTGACAAATGGGAATTCGCGAACGAGAATTTCAAGCGAGGAAGCAAGGAGCTTCTCGCCGGCATCAAGCGGCGGAAGACGGTGCTCCAATCGACAGCGGCCCGCGGCGGCGGCAACTCGGCGTTGGGCGGCGACGACATGGGCTCCACGTCGACGGGATCTGTGGAGCTGGCGACTCAGCGCGCGGATTTATTGGGCGAGAACGAGAAATTGAAGAAGGACAACGTGAAATTAAGCTGTGAGCTGGCGCGGGCGAAGAAGCAGTGCGATGAGCTCGTGGCCTTCATGAGGGACACTCTCAAAGTGGGTCCCGACCAGATCGACCGCATAATTCAGCGAGGAACTTGTGGGTCCAGCCTCGATGCGGTGCGTTTCGATGGTCACAATGATGTTACTGATGATGATGACGAAAATGCGGTGGTTGAGGAAAGTGTGAAACTGTTTGGGGTTTGGTTGAAAGGAGAAGAAGGGAAACAGAAACTGAGGATTGGTGCTGCTGCCACAGCTGCCAATAAGGGTAACTGCTGCCTCAAGAGAGGGCGCCAGGACCAAATGGCCTTGGCGGGCCTTGTGCCAAGGTGTTGA 753 0.5365 MILPPMTVVSWSESGNTFVVWKHADFAKDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANENFKRGSKELLAGIKRRKTVLQSTAARGGGNSALGGDDMGSTSTGSVELATQRADLLGENEKLKKDNVKLSCELARAKKQCDELVAFMRDTLKVGPDQIDRIIQRGTCGSSLDAVRFDGHNDVTDDDDENAVVEESVKLFGVWLKGEEGKQKLRIGAAATAANKGNCCLKRGRQDQMALAGLVPRC* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1051 250 MobiDBLite consensus disorder prediction 89 108 - -
Dod05g1051 250 ProSitePatterns HSF-type DNA-binding domain signature. 31 55 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod05g1051 250 Coils Coil 117 144 - -
Dod05g1051 250 PRINTS Heat shock factor (HSF) domain signature 30 42 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod05g1051 250 PRINTS Heat shock factor (HSF) domain signature 43 55 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod05g1051 250 SMART hsfneu3 1 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod05g1051 250 Gene3D - 4 83 IPR036388 -
Dod05g1051 250 SUPERFAMILY "Winged helix" DNA-binding domain 7 81 IPR036390 -
Dod05g1051 250 Pfam HSF-type DNA-binding 7 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod05g1051 250 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-1 8 216 - -
Dod05g1051 250 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 8 216 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1051 Dod-Chr5 27680702 27685737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1051 8 215 HSF AT4G36990 52.915 5.21e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod05g1051 HSF_DNA-bind 3.8e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1051 K09419 - gmx:100801897 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0697 02 9103064 9106868 Dod05g1051 05 27680702 27685737 PCT