Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1037 ATGCTTCTACAGGTTGCATCTAGTGAAGCACAGAAATTTGTGAGCTCAATGAAGGTTACCACAGAGGCAACAACCTCTCGTGGCGAGGCCAAGTCATCTGCTGTAATTCGAGCAGAAGAGATCCGATCAAATTTGGAGCAGGAATTCCCTAGTTTTGTGAAGTCACTAGTCAGGTCACATGTTGCTAGCTGTTTTTGGATGGGGCTGCCTGTGGCATTTTGTAAAAGACACTTACCAGATAAGGACACAACAATCACTTTGGAAGATGAATTCGGTAAAGAATACAAGATGAAATACATTGCATATAAGACAGGACTTAGTGCTGGTTGGAGACAGTTTTCTGCTGTGCATAGATTGCAAGAGGGTGATGTCGTGGTCTTCCAGTTAGTTGAACCTACCAAATTTAAGGTTTATATAATTAGAGCTGATAATTTGAGGGAAGTAGATGGGGCCCTTTCCCTGATGAATCTAGACAGTTATACAAAACAAAAATTGGGAGGCAAGATTTACAAAGAAAACCCAGATACTGATGTTGTAGCGTACAACAGCTCAAAGAGAAAACAAGGCAAATCTGTTCCAATAGATGTCCAAAAGAAAAAGAGGACAGGTGTGGCAAGACTGGGGCAAAAGCCTAGGCAGTCAGCAGAACAATCCGAACATGATAGTGAGGAAGCTCTCTCAGAAGTATTGGAGAGTTTTAAAATGCTTGAATTCAAAGATGTGAAAGGATTTGAAAATTTCAGCATCATAGTTGAGGGAGTGCCAATCGATGCTGAGCTCTCTAATGAAGTTCGACACAAGTACTACAAGCTATGCTACAGTCAACGTTCCTTTCTTCATGACAATCTCATCAAGGGCATGAACTATAAGCTGATTGCTGGAATTATATCTGAAACCGTCAACATTGCTGATGCTATAAAAGTTAGCGTGATAGCTACCCCACGTGTTGAGTTCACAAATTGGGATAAAACTTTGATTGCCTTTGAGCATCTGGGAATGAACGTTGAATTTTTGAGAGTCAAATTACGACGGCTTGTAAGCATTGCCTATGAAACTGAAGATGCCTCAGAGACAAGAAGATGCTTTTTATATAGAATTGAGCACAGTCGAGCAGATGGTGAAATAAAGAACATGGAAACCAAGCTAGAAGAGTTGAAAGGAGCTTGTAATGATTTTGGTGCTTATATTGAAAGTTTGAAGTTGAAAGCTGAAAGCTATCAGCATAAGTTTCAGAAAGAGGCTGCTGCTCCTTGGTGA 1257 0.4057 MLLQVASSEAQKFVSSMKVTTEATTSRGEAKSSAVIRAEEIRSNLEQEFPSFVKSLVRSHVASCFWMGLPVAFCKRHLPDKDTTITLEDEFGKEYKMKYIAYKTGLSAGWRQFSAVHRLQEGDVVVFQLVEPTKFKVYIIRADNLREVDGALSLMNLDSYTKQKLGGKIYKENPDTDVVAYNSSKRKQGKSVPIDVQKKKRTGVARLGQKPRQSAEQSEHDSEEALSEVLESFKMLEFKDVKGFENFSIIVEGVPIDAELSNEVRHKYYKLCYSQRSFLHDNLIKGMNYKLIAGIISETVNIADAIKVSVIATPRVEFTNWDKTLIAFEHLGMNVEFLRVKLRRLVSIAYETEDASETRRCFLYRIEHSRADGEIKNMETKLEELKGACNDFGAYIESLKLKAESYQHKFQKEAAAPW* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1037 418 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0234100-LIKE 6 356 - -
Dod05g1037 418 CDD B3_DNA 50 141 IPR003340 GO:0003677
Dod05g1037 418 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 6 356 IPR044837 -
Dod05g1037 418 Gene3D - 29 145 IPR015300 -
Dod05g1037 418 SMART B3_2 52 143 IPR003340 GO:0003677
Dod05g1037 418 ProSiteProfiles B3 DNA-binding domain profile. 52 143 IPR003340 GO:0003677
Dod05g1037 418 Pfam B3 DNA binding domain 52 142 IPR003340 GO:0003677
Dod05g1037 418 MobiDBLite consensus disorder prediction 203 222 - -
Dod05g1037 418 SUPERFAMILY DNA-binding pseudobarrel domain 46 143 IPR015300 -
Dod05g1037 418 Coils Coil 368 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1037 Dod-Chr5 27337093 27340602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1037 29 203 B3 DNA Binding Superfamily AT3G19184 40.556 1.56e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dod05g1037 B3 4.4e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1037 - - gmx:100819237 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1037 05 27337093 27340602 Dod05g1037 05 27337093 27340602 ECH