Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1024 ATGGATATGCTTCAAGGTGTCTGTGTTGTTCGATCTGAAAAGATTAAGGATGAGTTGATCTTGGATGGGAATGACATTAAGCTTGTTTCTAGGTCCTGTGCCCTCATTAACCAGAAATGTCATGTTAAAAATACGGATATCTGGAAGTTCCTTGATGGTATCTACATTAGCAAGAAGGGAACAATACTTGAAGAGTAG 198 0.3838 MDMLQGVCVVRSEKIKDELILDGNDIKLVSRSCALINQKCHVKNTDIWKFLDGIYISKKGTILEE* 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1024 65 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 1 64 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Dod05g1024 65 Gene3D - 1 65 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Dod05g1024 65 PANTHER RIBOSOMAL PROTEIN L6-RELATED 1 64 - -
Dod05g1024 65 SUPERFAMILY Ribosomal protein L6 3 59 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1024 Dod-Chr5 26770592 26770884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1024 1 65 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 73.846 1.35e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1024 K02940 - gmx:100810086 115.931