Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1014 ATGCGTTGGCTACCCACCCTTTCCTTCTCCCATTCCAATAATTCCTCCGCATCCTCCTCCGCCACCGTCGTAGACCACCGCAGGAAAACGTGGCTGTTCGGCACGCGGCCCAATAAACTCCGCCATGTGGCAGACCACGACGGTAGGTCCCCTCCGAGGTGCCAGCAGGACTCCGACGAAGACGCAACCGTGTCGCTCTCGTATTCCCCAACCGGCATTCGGTCCTCCACCTCCTCCTCCTCCTCTTCCTCCGTCGTGCCTCACCCGCTCCCATTGCCGGACGCCGCCGCCTCGCTCCGCCAGCGAGACGGCGACTACCGTCTTCCTTCTCCGAAGGATGTGCCAGGGGCCACTGACACTGGTGGCGGAGGCGGCTTCCGAGGCCTAGAGGATCGCGATCGGGCTGATGGCGCCACCGTTGCGGACGGTGCACCCCCCACTGGTTTTAGGATGAGGAGTGTTTTTGCTAGCCAGGACACAAGGAGGAATACGGAGCATTCTGAAAGCGCACGAGATACCAACTGGGCCGGTGTCCCAGGTAGGAGTTCTTCAGGTAGTCCTTTTGCCAGTCCCAAAATCAGCCCACACAGAACCAGTGATGATTTTGTGCCATATCGCTATGTGGCTCCCAAAGGAAATCAATTCTGGTCTGCACCAGAGATGCATACGTCTGAAGCAGGGCTGCCACCCCCTGCCTTCTTTGACTTATCAGCATCAGGCACTGAAACTTCTCCATGTCACAGTTCACAGGGAAGAAGTCCCCATCAACAGCATAGAAGCTCAAGTGGGCCTCCATCACCCATACATACCATGAAGGCTCTTGAGACATCGACAGCACGCCGTGAAAGTAACGCTGTCTGTGTTCACCGCTTACCCCTGCCTCCTGGGGCAGCCTTATCTTCACCTACTGCTGCAGCTGCCTATTCCCATGCTGTGGCTAAATTGGAATCATTGCCAATGAAAAGCCAATGGCAAAAAGGGAAACTTATTGGGCGTGGTACATTTGGAAGTGTTTATGTTGCCACCAATAGAGAAACTGGAGCATTATGTGCAATGAAGGAAGTAGAATTATTACATGATGATCCAAAATCTGCGGAGTCTATAAAGCAGTTAGAGCAGGAAATCAAACTTCTTAGCAATCTGAAACATTCAAATATTGTGCAGTATTATGGAAGTGAAATAGTTGAAGATCGGTTTTATATTTATCTGGAATATGTCCACCCTGGTTCGATAAATAAATATGTCCGCGAACATTGTGGTGCCATAACAGAATCTGTCATTAGGAATTTTACTCGCCATATTCTTTCAGGGTTGGCTTATTTGCACAGCAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTACTTGTTGATTCTGCGGGAGTTGTCAAACTTGCTGATTTTGGAATGGCCAAGCATCTAACTGGACATGAAGCTGATCTCTCTTTGAAGGGAAGTCCATACTGGATGGCTCCAGAGCTTATGCAAGCAGTTATGCAAAAGGATAACAGCTCAGATCTAGCTTTTGCTATTGATATTTGGAGTCTGGGTTGTACGATCATTGAAATGTTCACAGGGAAGCCTCCTTGGAGTGAGTACGAAGGGGCTGCAGCCATGTTTAAGGTTATGAGAGATACCCCACCTATACCTGAAACATTGTCATCTGATGGTAAAGATTTCCTGAGGTGCTGCTTCATAAGAAATCCAGCTGAGCGCCCAACTGCTGCAGTGTTGCTAGAACATCGTTTTTTGAAAAACTCACAGCAGCCAGATGTTACATCTTCCATCCAGATGTATAATGGAACAAACTTCATGGATAAACCCTATAGTCCCCATACTCCCAGAAGGCAACCTGAAAATATACCTGATCAGAACTCTATATCCACTGCAAGGATTTCAAACGGGAAAGCTGCTGAGAGGCGAGGATTTCTCATTCCTTCCTTGGATATCCTGCCTGCATATCGGAACCAATGA 1977 0.4906 MRWLPTLSFSHSNNSSASSSATVVDHRRKTWLFGTRPNKLRHVADHDGRSPPRCQQDSDEDATVSLSYSPTGIRSSTSSSSSSSVVPHPLPLPDAAASLRQRDGDYRLPSPKDVPGATDTGGGGGFRGLEDRDRADGATVADGAPPTGFRMRSVFASQDTRRNTEHSESARDTNWAGVPGRSSSGSPFASPKISPHRTSDDFVPYRYVAPKGNQFWSAPEMHTSEAGLPPPAFFDLSASGTETSPCHSSQGRSPHQQHRSSSGPPSPIHTMKALETSTARRESNAVCVHRLPLPPGAALSSPTAAAAYSHAVAKLESLPMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVELLHDDPKSAESIKQLEQEIKLLSNLKHSNIVQYYGSEIVEDRFYIYLEYVHPGSINKYVREHCGAITESVIRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHEADLSLKGSPYWMAPELMQAVMQKDNSSDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMRDTPPIPETLSSDGKDFLRCCFIRNPAERPTAAVLLEHRFLKNSQQPDVTSSIQMYNGTNFMDKPYSPHTPRRQPENIPDQNSISTARISNGKAAERRGFLIPSLDILPAYRNQ* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1014 658 ProSitePatterns Protein kinases ATP-binding region signature. 330 353 IPR017441 GO:0005524
Dod05g1014 658 MobiDBLite consensus disorder prediction 176 193 - -
Dod05g1014 658 SUPERFAMILY Protein kinase-like (PK-like) 317 625 IPR011009 -
Dod05g1014 658 MobiDBLite consensus disorder prediction 237 281 - -
Dod05g1014 658 MobiDBLite consensus disorder prediction 57 87 - -
Dod05g1014 658 MobiDBLite consensus disorder prediction 221 281 - -
Dod05g1014 658 MobiDBLite consensus disorder prediction 41 56 - -
Dod05g1014 658 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 629 - -
Dod05g1014 658 MobiDBLite consensus disorder prediction 604 634 - -
Dod05g1014 658 Pfam Protein kinase domain 325 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1014 658 Gene3D Transferase(Phosphotransferase) domain 1 320 618 - -
Dod05g1014 658 MobiDBLite consensus disorder prediction 618 634 - -
Dod05g1014 658 MobiDBLite consensus disorder prediction 41 200 - -
Dod05g1014 658 SMART serkin_6 324 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1014 658 ProSiteProfiles Protein kinase domain profile. 324 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1014 658 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 629 - -
Dod05g1014 658 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1014 Dod-Chr5 25256265 25262442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1014 127 625 MAP Kinase Kinase Kinase AT5G66850 62.664 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod05g1014 Pkinase 9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1014 - - gmx:100796935 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0674 02 8798536 8802802 Dod05g1014 05 25256265 25262442 PCT