Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1011 ATGCGTGTTGACCCACCTTGGGGTGGGCTACGAGTTGAAATGTCGAATCTAGGCAACTATAGTATGGAGTTAGGAAAATTCCAAACTGGGGCTCATCCTACTCGAGTTGGGCTACGTAGGCATGGCAACTACAATCTTAGAGTTAGAGCCGACATAAATGATGTTATTGCTGCTCTCGCAAGGGAAGCTGGATGGGTGGTTCTTCCGGACAGCACTACTTTTCCTTCAAGATCTCAAGGTCAAAGGCCAGCTGGTGGCAATTCTGCAGTTGTCACATTATCATCTTCCCATGTCCCTTCACAACAGACTCCATCTGGTTCTATCAGGGGAGTTGCTTCTGGCTATAGGAGCCCATTAGAGTATAATGCATGTCAAATGAAAGGTGGTTTTATGCCAGTTCCATCTCCTTATGATCTATAG 420 0.4619 MRVDPPWGGLRVEMSNLGNYSMELGKFQTGAHPTRVGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDSTTFPSRSQGQRPAGGNSAVVTLSSSHVPSQQTPSGSIRGVASGYRSPLEYNACQMKGGFMPVPSPYDL* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1011 139 PANTHER - 34 138 IPR001554 GO:0000272|GO:0016161
Dod05g1011 139 MobiDBLite consensus disorder prediction 71 110 - -
Dod05g1011 139 Pfam BES1/BZR1 plant transcription factor, N-terminal 37 130 IPR008540 -
Dod05g1011 139 PANTHER BETA-AMYLASE 34 138 - -
Dod05g1011 139 MobiDBLite consensus disorder prediction 70 111 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1011 37 139 Glycoside Hydrolase AT2G45880 67.308 7.20e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Dod05g1011 BES1_N 7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1011 K01177 - gmx:100812659 184.496