Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g1008 ATGGATCGGGCGGCTGTGACCGTCGGACCCGCCATGGACATGCCGATCATGCACGACAGCGATCGTTACGATCTGGTCCGCGACATCGGGTCCGGAAATTTCGGCGTGGCGAGGCTGATGCAGGACAAGCAGACCAAGGAGCTTGTTGCTGTCAAGTACATCGAACGTGGTGACAAGATTGATGAAAATGTCAAGAGAGAAATCATTAATCACAGGTCTCTGAGACACCCTAATATTGTTAGGTTTAAAGAGGTCATTTTAACACCTACTCATCTGGCCATTGTAATGGAATATGCATCTGGTGGAGAACTCTTTGAGCGAATCTGCAATGCTGGGCGTTTTACTGAGGATGAGGCACGTTTCTTCTTTCAACAACTCATATCTGGGGTTAGCTATTGTCATGCAATGCAAGTATGTCATCGAGACCTGAAGTTGGAGAACACTTTGTTGGATGGAAGCCCAGCACCTCGTTTGAAGATATGCGATTTTGGTTACTCCAAGTCTTCAGTGCTTCATTCACAACCGAAGTCAACTGTTGGTACTCCTGCATATATTGCTCCAGAAGTACTGCTGAGGCAAGAATATGATGGCAAGATTGCAGACGTCTGGTCATGTGGAGTAACCTTATATGTTATGCTAGTGGGAGCCTATCCTTTTGAAGATCCAAATGAACCAAAGGATTTCCGGAAGACAATTCAGAGAATTCTTAGTGTCCAGTATTCCATTCCCGATTGTGTTCAAATATCTCCCGAGTGTTGCCACCTCATCTCAAGGATATTTGTTTTTGACCCGGCAGAGAGAATAACAATGTCTGAAATCTGGAACCATGAATGGTTTCTGAAGAATCTCCCTGCTGACCTGATGGATGAGAAGATAATGGGTAACCAATTTGAAGAGCCAGACCAACCCATGCAGAGCATTGATACCATCATGCAGATAATTTCAGAGGCTACCATACCAGCAGCCGGCGCCTATTCTTTAGACCAGTTTATGGCAGAAAACATTGATATGGATGATATTGATGAATTAGAATCTGAATCTGAGCTTGATATAGATAGCAGTGGGGAGATAGTGTATGCCATATAA 1086 0.4448 MDRAAVTVGPAMDMPIMHDSDRYDLVRDIGSGNFGVARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRILSVQYSIPDCVQISPECCHLISRIFVFDPAERITMSEIWNHEWFLKNLPADLMDEKIMGNQFEEPDQPMQSIDTIMQIISEATIPAAGAYSLDQFMAENIDMDDIDELESESELDIDSSGEIVYAI* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g1008 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Dod05g1008 361 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 14 355 - -
Dod05g1008 361 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Dod05g1008 361 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Dod05g1008 361 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1008 361 PANTHER SERINE/THREONINE KINASE 14 355 - -
Dod05g1008 361 SUPERFAMILY Protein kinase-like (PK-like) 15 315 IPR011009 -
Dod05g1008 361 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Dod05g1008 361 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g1008 361 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g1008 Dod-Chr5 24847751 24858010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g1008 16 289 CBL-interacting serine-threonine protein kinases AT4G24400 42.403 7.97e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Dod05g1008 Pkinase 5.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g1008 K14498 - gmx:100806949 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1008 05 24847751 24858010 Dod05g1008 05 24847751 24858010 ECH
Dod05g1008 05 24847751 24858010 Dod02g0669 02 8690496 8694875 PCT