Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0948 ATGCCGCCATTCAGAGCTTTTCGACCAGAAAACCTTTTCCTCTACACCACCACCACCACCACCACCTTCTACCCCATCTCCTTCAGGGCTTATGTTGGTCACTCCATTTACAAAGGGAAGGCTACACTTATAGTGACTCCTAGGCCTCTGGAATTCATGCCGCTCGATAGTGAAGCTGGGAAATTGAACATGTTACCCTCTGTGGCTATTGGAGTGCGACAAGAAATAGGCAGGCGGTTTTGCTCTAAGGTGATTTTGAAAGAGCCAGTTTACGTGGTAGAGTTCTCAAGTTGTAAAGCTCTTGAAAGGGTGTCCCTAAGAACACTACGAAGAACAATTGTTGTTGGACTTGTGACCAGAATAATTGAAGAGCAAGACTAG 381 0.4593 MPPFRAFRPENLFLYTTTTTTTFYPISFRAYVGHSIYKGKATLIVTPRPLEFMPLDSEAGKLNMLPSVAIGVRQEIGRRFCSKVILKEPVYVVEFSSCKALERVSLRTLRRTIVVGLVTRIIEEQD* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0948 126 Gene3D Transcriptional Coactivator Pc4; Chain A 26 82 IPR009044 GO:0003677|GO:0006355
Dod05g0948 126 SUPERFAMILY ssDNA-binding transcriptional regulator domain 29 64 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0948 Dod-Chr5 19230953 19233720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0948 29 74 Whirly Transcription Factor Family AT1G14410 55.556 2.99e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0948 - K14416 gmx:100798594 64.3142