Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0944 ATGGGAACCGGGGAAGAGAGCACAACTAAACCTTCTAAATCAACTTCATCAACTCAGGAGATACCGACAGCTCCTTCATATCCAGATTGGTCAAGCTCCATGCAGGCTTATTATGCTCCTGGAGCCACTCCACCTCCCTTTTTTGCCTCAACTGTTGCTTCCCCAACTTCCCATCCCTATTTATGGGGAGCCCAGCATCCTGTAATGCCCCCATACGGGACTCCGGTTCCATATCCAGCTATATACCATCCTGGGAGTGTCTATGCTCATCCTAGCATGGCATTGACTCCAAGTGTTATGCAGCAAAGTACAGAGTTTCAAGGGAAGGGACCTGATGGAAAAGATCGGGATTCAGCCAAAAAATTGAAGGGAACTAATGCAAATACAGGTTCCAAAGCAGGAGATAGTGGAAAGGCAGGTTCAGGTTCAGGCATTGATGACACCTCAGAAAGTGCTGAAAGTGGTTCAGAGGGTTCATCAAATGCTAGTGATGAGAATACTAACCAACAGGAATCATCAGCTACAAACAGGAAGGGAAGCTTTGACCAAATGCTTGTTGATGGAGCCAATGCACAGAACAATTCTGCCAGTGCCATTTCTCAGTCTTCTGTGCCTGGAAATCCTGTTGTCTCAATGCCTGCAACTAATCTTAATATTGGAATGGACTTATGGAATGCATCTCCTGCTGGAGCTGAAGCTGCAAAAATGAGACATAATCAATCTGGTGCTCCTTCAACCATAATGAGACGTGAAGTTGCACTTGGTGAACAATGGGATGAGCGGGAGCTGAAAAGACAGAAGAGGAAACAGTCTAATAGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAGACATTGGGAAGTGAGAATCGAACTCTCAGAGATGAACTTCAGAGACTTTCTGAAGAATGCGAGAACCTTACATCTGAAAATAATTCTATCAAGTTGCTTTATACAGGAAGAGTTGGAACGGTTGTGTGGGCCAGAAGCAGTTGCTAA 1032 0.4545 MGTGEESTTKPSKSTSSTQEIPTAPSYPDWSSSMQAYYAPGATPPPFFASTVASPTSHPYLWGAQHPVMPPYGTPVPYPAIYHPGSVYAHPSMALTPSVMQQSTEFQGKGPDGKDRDSAKKLKGTNANTGSKAGDSGKAGSGSGIDDTSESAESGSEGSSNASDENTNQQESSATNRKGSFDQMLVDGANAQNNSASAISQSSVPGNPVVSMPATNLNIGMDLWNASPAGAEAAKMRHNQSGAPSTIMRREVALGEQWDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVETLGSENRTLRDELQRLSEECENLTSENNSIKLLYTGRVGTVVWARSSC* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0944 343 CDD bZIP_plant_GBF1 265 315 IPR045314 GO:0003700|GO:0006355
Dod05g0944 343 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 267 282 IPR004827 GO:0003700|GO:0006355
Dod05g0944 343 MobiDBLite consensus disorder prediction 123 178 - -
Dod05g0944 343 MobiDBLite consensus disorder prediction 100 178 - -
Dod05g0944 343 Gene3D - 263 327 - -
Dod05g0944 343 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 326 IPR044827 GO:0003700|GO:0006355|GO:0043565
Dod05g0944 343 Coils Coil 273 328 - -
Dod05g0944 343 MobiDBLite consensus disorder prediction 263 284 - -
Dod05g0944 343 SUPERFAMILY Leucine zipper domain 263 319 IPR046347 GO:0003700|GO:0006355
Dod05g0944 343 PANTHER G-BOX-BINDING FACTOR 1 1 326 - -
Dod05g0944 343 Pfam bZIP transcription factor 260 322 IPR004827 GO:0003700|GO:0006355
Dod05g0944 343 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Dod05g0944 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 262 325 IPR004827 GO:0003700|GO:0006355
Dod05g0944 343 SMART brlzneu 260 324 IPR004827 GO:0003700|GO:0006355
Dod05g0944 343 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0944 Dod-Chr5 18754708 18760979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0944 1 326 bZIP Transcription Factor Family AT4G36730 54.103 2.46e-100 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dod05g0944 MFMR 3.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0944 K09060 - gmx:778124 494.582