Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0921 ATGAGCGACGCCGTATCGGAGCTTAGTACCTCCGATGTCGGCACGCCAAAGCGCCACAGTGCGAGCCGAGAAGGAGGCGAGGACCAAGAGCAAGGTTCCAATGCGGGCAATGACACCAAGAAGAAGAGGAAGCCTAATGGAACTGTCACTCCCCGAAAAAGAGGCTCCAAGGGTAGCACGCCAAAGAAGAATGTGTCGGGTCATAGGATTATGGAGACAGCTTCACCTGATTCAGCTCGAAAGATTGATTTGCGGTTGGAGGCAAAATTGTCAGCGGAGGAGAACTCGAGGATGTTTGCGGGCCGGCAAATACATCCATTTTTTTCGACGTGGAAGGTGGGGAAGAAATCTCAGGAGCTGGCCAGTGTGGAGCCTAGTTTATGCACAGCTAGCAGGGAGGATGGAAGAATTATGTGTGGTCCTGTTCATGTTTTTGAAAATTGCCAGGATGATACCTCATCCCTTGACTGGAGTAATTGGACATTTTTGGGCAAGACTGCCATTGTGGGTTGCAGTTCAGAAAGTTCAAGTTCATCTATTTTGGAGGGTTCTGTTGAACCCTTAAGTTTTGATAACCTTCTTGATGCCCTAGATCCGACCTGCGCTTTAATTTCTAAGAACGCTTTGTCTTGCTCAGATCATCAGCTTTCTGTTCTACCAGACAATCTGCAAGAGATATCACTAGCAAATTCAACTGTGCCAGTTAATGAGCAAACAATATGCCCTCCAAAGCCAGAAGATGTCAACATGGACTTGGAGGTTGATGAAGTCAGTCCTTTTTCAGGGAAAGTGGGCTGTCGTAGAAAGTCAGAAACTGAGCCCATGAGTAGATTTCTCCAAGAAAGTATGAAGTCTTACTACCAGAGTTGTGAAGATAAGGCTGAGGGAAGCTTATGGACTCACAAGTACAAGCCAACAAAGGCCTTTCAGGTGTGCGGTAATGATGAATCTGTGAATTTCTTGCGTGACTGGTTACATCTTTGGCATGAAAGACATCAAAGCAGAAAGGATTCCTCTAACAGGGGTCAAAGTGACATGCAAGGCAATGATGATGATTATAATGGTTCTGATGGTGACTATGATTTGGAAGATGTTAATGAGGACAAATCCCTGCAGAACATTCTTCTAGTTACAGGACCAGTTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCAAGAGCAAGGGTTTGATGTTTTAGAGCTTAATGCATCAGACTGGCGAAATGGAACTGCTGTCAAGCAGTATTTTGGAGATGCTCTTGGATCACATGGGTTCAAAAGGGTATTGGAACGCACTGTGAGTTCACAGAAGAAAACTGTGAAATCACCCCCAGCTCCAGCTTTGCCCGATGAAAAAGTAGCTGAGGAGACGGATGATGGAGTAATTGAGCTGATAACCATAACTGATGATGGATCTCATAGTCCTGATGGAACATCTCCGAGGTTACAATGCAAAAATAGTACATTTACATGTGATAATGCACAAACTTTAATTCTAGTTGAGGATGTGGACATCCTTTTTCCAGAAGATCGTGGATGTATTGCTGCCATACAACACATTGCTGAGACAGCAAAAGGGCCAATTATATTGACAAGCAATAGCATTAAGGCTGGTCTTCTAGATAACTTTGCTAGACTAGATGTTTCTTTCTCATTGCCATCACCACAGCAGTTGCTTTGCCATTTGTACATGGTTTGTGTCACAGAACAAGTCAACATCAATCCTCTTTTACTGGAGAGGTTTATACAGTCTTGTAATGGAGATATTCGTAAAACCACTATGCAACTTCAGTTCTGGCTCCAGAGCAAAAAATATGCAAAAGACCAGAAAGTGCAGTGTGTGTATGGCCTACTTCCATTTGATCTTGAGGCTGGTCATCAGACACTCCCAAAGATAATACCGTGGAGTTTTCCCTCAGAGTTATCCAAACTCATTGACAAGGAAGTTGCCAAGGCAGTAACCATACTGGAACAAAACTCATGCTTGCCCGGGTTAGTCAAGAAAGAGCTTCACTCAAATAAAAAGGAAAATGATTTAGATGTGCATTATATGAGGACTAGTCATGTAGAAGCCAACAAGAGAGAGATGATTAAGAAGAATAGATCTATTGCAGATTGCAGTGAGTTTGAACGTCAGTATAATGCTATTTCTGAGCTTTCTACTTTTTCTGGAATCCCAGGGGCATCCTCTTGTCAAAACAGCCAGAGGAAGCTTGTAGTGGTTTCCTCTGATTCTGTGGATAAGGATCCAAATGGACATTTTCTAAATGCGCATGTTGAAGCTTACAAGGGACAATCCCATGAAGGCAATATTGAATCTCCCTGTAAGTTTCAACTTAATCAAAGCTACACAAGCATGTCATTTTGCAAGCTAGTTTGTTCTGGTATGGATGTTTCAAACAAGCAACAGTGTAGATATTTAGGAACAGCTGATGACGCGTGCTTAAATGAAACATGTAAATCATTTGATATGTCCTGTGTGCCAGAATTAATATTTGTTCCTGAGACTGCAATTGAAAATGGAACGGAGACCATGTTTGGAGCAGTGTCTTCTCACCATCTGCGTGATCCAGCTGAAGCTTTCCTGAATAATGTGTTCACCCCATTGACTTTCAATGATTGTCAGTGCGTAGCCAAATTTGCTCAAAATTCAGAACCATTGGTGAATACTAAAATTCCAGAATCTTCTCCAAAAGCAGATGTGCAAGATTTTCAAGATGAGAATATGGGAACTACAACTGTGCAAAATGGGATAGATGAGTGCATTGATGTTGATTTCAAACTGAAGTCAGTGTTCGTTGACTCCAATCCATCTATGGAGACAGATACGGTTCAAAATTTGTGGAGGAAACTTCATGATTGTCGAATGGATTTAAGACAGCATGCATCCTCAGAACAGCTAGGTGCTGTTCGAGTTGTTAAACTTGTTAGTGGGCTGAGCAATCTATTTTCAGAAGCTGACTTGCTGTTTCATAATCACCAACAAAAGCAATGTGGTATTATGGAACATCCAGTTTTCCTTTCTGATGAAGCCACATTTAGTTGGTATGATGAACAAATGATGATGTCTACTGTAGCTGTACATGGGTTTTGTTTGTATGCTAAACATGTATCAGATGTGGGATCAAAGCTGGGTTGTGAGACTGACAGTATAGATTTAACTTCAGAGATGCTGGCTTCCGCTACTGATGTTATGGCGCTGGGCAAGTTATCTAGACAGGACCACACGAAAAGCATGAATAACTATTCTAGAAAGCAATTAGAGGTGAACAAACCAGGAAATGATAAGAGGAGTGAAAACAAAACATCGCTGTTCAACGTGATCCGGTCCATTGTTCCTGCAAGATTATCACTGGCATTGAAAGGTATTTCTTTCAATGAGTATCTATCCTCACTGCGCCAAATTTCAACTTCAGAAAGTTTCCGCATTTCACAAGGTGTTGAGAAGAAGAGAGGACGAAGGGTGCGGAGTGCTCAACATTATTTGAGCAGAGGCACAATGATGTTGTCTCCTGAAGATATATTATTGGTGTGTGAGGGTGATTTGTACAGAAAGATTTCTTCACAATACACAGCTAACGTGGGAAGCAGCTGTACATGA 3606 0.4229 MSDAVSELSTSDVGTPKRHSASREGGEDQEQGSNAGNDTKKKRKPNGTVTPRKRGSKGSTPKKNVSGHRIMETASPDSARKIDLRLEAKLSAEENSRMFAGRQIHPFFSTWKVGKKSQELASVEPSLCTASREDGRIMCGPVHVFENCQDDTSSLDWSNWTFLGKTAIVGCSSESSSSSILEGSVEPLSFDNLLDALDPTCALISKNALSCSDHQLSVLPDNLQEISLANSTVPVNEQTICPPKPEDVNMDLEVDEVSPFSGKVGCRRKSETEPMSRFLQESMKSYYQSCEDKAEGSLWTHKYKPTKAFQVCGNDESVNFLRDWLHLWHERHQSRKDSSNRGQSDMQGNDDDYNGSDGDYDLEDVNEDKSLQNILLVTGPVGSGKSAAVYACAQEQGFDVLELNASDWRNGTAVKQYFGDALGSHGFKRVLERTVSSQKKTVKSPPAPALPDEKVAEETDDGVIELITITDDGSHSPDGTSPRLQCKNSTFTCDNAQTLILVEDVDILFPEDRGCIAAIQHIAETAKGPIILTSNSIKAGLLDNFARLDVSFSLPSPQQLLCHLYMVCVTEQVNINPLLLERFIQSCNGDIRKTTMQLQFWLQSKKYAKDQKVQCVYGLLPFDLEAGHQTLPKIIPWSFPSELSKLIDKEVAKAVTILEQNSCLPGLVKKELHSNKKENDLDVHYMRTSHVEANKREMIKKNRSIADCSEFERQYNAISELSTFSGIPGASSCQNSQRKLVVVSSDSVDKDPNGHFLNAHVEAYKGQSHEGNIESPCKFQLNQSYTSMSFCKLVCSGMDVSNKQQCRYLGTADDACLNETCKSFDMSCVPELIFVPETAIENGTETMFGAVSSHHLRDPAEAFLNNVFTPLTFNDCQCVAKFAQNSEPLVNTKIPESSPKADVQDFQDENMGTTTVQNGIDECIDVDFKLKSVFVDSNPSMETDTVQNLWRKLHDCRMDLRQHASSEQLGAVRVVKLVSGLSNLFSEADLLFHNHQQKQCGIMEHPVFLSDEATFSWYDEQMMMSTVAVHGFCLYAKHVSDVGSKLGCETDSIDLTSEMLASATDVMALGKLSRQDHTKSMNNYSRKQLEVNKPGNDKRSENKTSLFNVIRSIVPARLSLALKGISFNEYLSSLRQISTSESFRISQGVEKKRGRRVRSAQHYLSRGTMMLSPEDILLVCEGDLYRKISSQYTANVGSSCT* 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0921 1201 CDD AAA 362 436 - -
Dod05g0921 1201 MobiDBLite consensus disorder prediction 1 78 - -
Dod05g0921 1201 Gene3D - 296 553 IPR027417 -
Dod05g0921 1201 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 10 1197 - -
Dod05g0921 1201 MobiDBLite consensus disorder prediction 1 16 - -
Dod05g0921 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 606 IPR027417 -
Dod05g0921 1201 MobiDBLite consensus disorder prediction 333 362 - -
Dod05g0921 1201 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 10 1197 IPR004582 GO:0006281
Dod05g0921 1201 Gene3D - 555 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0921 Dod-Chr5 17339427 17349508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0921 299 409 Core DNA Replication Machinery Family AT5G22010 28.829 4.17e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0921 - - ahf:112785977 1373.22