Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0917 ATGATCATGATGCGGGCTACGTATCATCGGTTGGTCGTGTTTTGCATTCTTTGTTGCCCCTGTTTTCTGCTGCAACTCACAAGGGGTTACATGGACTCGAATGCTGGAAGAGCTCTGCAGCAGGAGCTGGATGGTAATCATCAAATACATTGCTCTAGAGAAAGAAGCAGAGCAGCTTGGAAGATCATTCAGGAGTACTTGATGCCCGTCGTGGAGAAAGAAAAATATCATATCTCAAGAAGGTGTAAGCTTCACCCTGACAACGATCTATACAGAGATCAGGAACAACATAAATTTCATGTTGATATTAATGAATGGCAATGTGGGTACTGTAAGAAAGTTTTCTACGAAGAGAAACATCTTGACCAACATTTTGACAACAGACACTCCAATTTACTGAATTTGACTCACAGCCAGTGCTTAGCAGATGTATGTGGTGCAGTCCACTGTGACCTTGAAATTAATTCCGGGACAAAAAAATCAAAATGCAATCCAGCTGCTGCTGAAAGAAATAAACATCTGTGTGAGAGCTTAGCTGATAGTTGTTTTCCTGTCAACGATGGTCCTGCAGCAAGCCGACTTCATGAATTCTTCTTGCACCAATTCTGCGATGCACACAGTTGCACCGGAAGTAGGAAACCTTTCTCCAGAGGGCGCATGAAGAAGACCAATGTTTTCTACATCTTTGCCTCCATTTTGCTTGTGATGCTGCTGCTACTTTACTATCTCTACATTTACTTATATCAGAGAGGAATGAAAAGGGAAACTCAAGTGCTGAAGCGTATCTCTCAAACCAGCCGAAAGAAAAAGCCATCTTAA 819 0.4225 MIMMRATYHRLVVFCILCCPCFLLQLTRGYMDSNAGRALQQELDGNHQIHCSRERSRAAWKIIQEYLMPVVEKEKYHISRRCKLHPDNDLYRDQEQHKFHVDINEWQCGYCKKVFYEEKHLDQHFDNRHSNLLNLTHSQCLADVCGAVHCDLEINSGTKKSKCNPAAAERNKHLCESLADSCFPVNDGPAASRLHEFFLHQFCDAHSCTGSRKPFSRGRMKKTNVFYIFASILLVMLLLLYYLYIYLYQRGMKRETQVLKRISQTSRKKKPS* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0917 272 PANTHER ZINC FINGER PROTEIN-RELATED 7 272 - -
Dod05g0917 272 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 131 IPR013087 -
Dod05g0917 272 ProSitePatterns Zinc finger C2H2 type domain signature. 108 129 IPR013087 -
Dod05g0917 272 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0917 Dod-Chr5 17092903 17098543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0917 26 272 C2H2 Transcription Factor Family AT5G63280 59.036 1.04e-106 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0917 - - gmx:100527694 463.766