Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0903 ATGGTTGATTTGCCGGTCCCAGTCCCAGCCCCCGCGGTCCCGGTACCCTCCCCCTTTGACCCTTTCGCTGATGCTGAAGAATCGGATGCCCCAGGGGCCAAGGAGTATGTTCACATTCGCATTCAGCAAAGGAATGGAAAGAAGAGCCTGACCACGGTGCAAGGGCTGAAGAAGGAGTACAGCTACCAGAAGATACTCAAGGACCTCAAGAAGGAGTTCTGCTGCAACGGGAATGTTGTGCAGGACAAGGAGCTTGGCAAGATAATCCAACTCCAAGGTGATCAGCGCAAGAACGTCTCTCACTTCCTTGTTCAAGCTGGCCTTGTGAGGAAGGAGCAGATCAAGATTCATGGTTTTTGA 360 0.525 MVDLPVPVPAPAVPVPSPFDPFADAEESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEYSYQKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSHFLVQAGLVRKEQIKIHGF* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0903 119 Pfam Translation initiation factor SUI1 34 107 IPR001950 GO:0003743|GO:0006413
Dod05g0903 119 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 15 119 IPR005874 GO:0003743
Dod05g0903 119 ProSiteProfiles Translation initiation factor SUI1 family profile. 37 107 IPR001950 GO:0003743|GO:0006413
Dod05g0903 119 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 13 119 - -
Dod05g0903 119 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 13 119 - -
Dod05g0903 119 CDD eIF1_SUI1 35 118 IPR005874 GO:0003743
Dod05g0903 119 Gene3D - 11 119 - -
Dod05g0903 119 PIRSF Transl_init_SUI1_Euk 12 119 IPR005874 GO:0003743
Dod05g0903 119 SUPERFAMILY eIF1-like 15 119 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0903 Dod-Chr5 16549862 16550221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0903 13 119 Eukaryotic Initiation Factors Gene Family AT5G54940 81.308 3.64e-64 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0903 K03113 - gmx:100791423 204.142