Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0902 ATGTTGCTGTTACTCCCCCGTCTCACAAATGGGGCTCCTTCGCAAACACACCATTCTCACCCACTCTCCCTCTCTCCAAAACTTCCCCAAACCCTGTTCGTTCACCTTCCCTCAAACACCACCCACTCTTTCTCCTCATTTTCTCCCCCGATTCGGTGCGGCATCAGGGAACTACGACACAGGATCGAAACGGTGAAGAACACGCAGAAGATCACCGAAGCGATGAAGCTAGTCGCCGTCGCCAGGGTCCGCCGAGCGCAAGAGGCCGTCATCAACGGAAGACCCTTCGCCCAGGCACTCGCGGAAGTCCTGTCCGACATCGTCGGACAACTCCGAACCGAAGACATCTCCGTCCCTCTCACCGACGTCAGGCCCGTGAAGAGGGCCGCCCTCGTCGTCATCACAGGGGACCGCGGCCTCTGCGGCGGTTTCAACAACGCCGTCACGAGGAAGGCCGAGGACCGAATCAAAGAGCTGGAGAGTCTCGGCATTGATTGCGTTGTGATCAGTGTTGGCAAAAAGGGCAACTCGTTTTTCGGCCGCAGGGGAAATTTTCAGGTTGATAGGTTCATTGAAGGTGGGAACTTCCCCACTGCGAAACAAGCGCAAGCCGTCGCCGATGATGTTTTCTCGTTGTTCGTTAGCGAAGAGGTTGATAAGGTTGAGCTTGTGTACACAAAATTTGTGTCTTTAGTGAGGTTTGATCCCGTGGTTCAGACTTTGTTGCCTTTGTCTTCCAAAGGAGAGGTTTGTGATGTGCATGGGAATTGTGTTGATGCAATTGGGGATGAGTTCTTTAGGTTGACCACTAAGGAAGGGAAGTTGGCTGTTGAGAGGGATGTTGGTGTTGTTGTGAGGAGGGAAAAAGGTGGATGCGTGCCGCTTATGCAGTTTGAGCAGGATCCTGTTCAGATCCTTGATGCCATGATGCCTCTCTATTTGAACAGCCAGATTCTTAGGGGGTTGCAAGAATCACTGGCTAGTGAGCTTGCTGCTAGAATGGGTGCCATGTCTAATGCAACTGATAATGCAATTGAATTGAAGAAGAGTCTTTCTGTTGCCTATAATCGGGAACGGCAGGCGAAGATCACAGGGGAGATATTGGAGATTGTGGCAGGAGCTGAGGCACTCACTCACACAAGTTGA 1146 0.5209 MLLLLPRLTNGAPSQTHHSHPLSLSPKLPQTLFVHLPSNTTHSFSSFSPPIRCGIRELRHRIETVKNTQKITEAMKLVAVARVRRAQEAVINGRPFAQALAEVLSDIVGQLRTEDISVPLTDVRPVKRAALVVITGDRGLCGGFNNAVTRKAEDRIKELESLGIDCVVISVGKKGNSFFGRRGNFQVDRFIEGGNFPTAKQAQAVADDVFSLFVSEEVDKVELVYTKFVSLVRFDPVVQTLLPLSSKGEVCDVHGNCVDAIGDEFFRLTTKEGKLAVERDVGVVVRREKGGCVPLMQFEQDPVQILDAMMPLYLNSQILRGLQESLASELAARMGAMSNATDNAIELKKSLSVAYNRERQAKITGEILEIVAGAEALTHTS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0902 381 CDD F1-ATPase_gamma 55 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dod05g0902 381 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 55 377 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dod05g0902 381 ProSitePatterns ATP synthase gamma subunit signature. 363 376 IPR023632 -
Dod05g0902 381 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 21 377 - -
Dod05g0902 381 Hamap ATP synthase gamma chain [atpG]. 52 377 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dod05g0902 381 PRINTS ATP synthase gamma subunit signature 324 343 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dod05g0902 381 PRINTS ATP synthase gamma subunit signature 219 236 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dod05g0902 381 PRINTS ATP synthase gamma subunit signature 355 376 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dod05g0902 381 PRINTS ATP synthase gamma subunit signature 126 145 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dod05g0902 381 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 54 377 IPR035968 GO:0015986|GO:0045261|GO:0046933
Dod05g0902 381 Pfam ATP synthase 55 377 IPR000131 GO:0015986|GO:0045261|GO:0046933
Dod05g0902 381 Gene3D - 121 246 - -
Dod05g0902 381 Gene3D ATP synthase, gamma subunit, helix hairpin domain 276 377 - -
Dod05g0902 381 Gene3D ATP synthase, gamma subunit, helix hairpin domain 53 120 - -
Dod05g0902 381 PANTHER ATP SYNTHASE GAMMA CHAIN 21 377 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0902 Dod-Chr5 16526274 16527868 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0902 33 380 Primary Pumps ATPases AT1G15700 71.105 9.87e-176 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0902 K02115 - rcu:8282943 499.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0902 05 16526274 16527868 Dod05g0902 05 16526274 16527868 ECH