Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0894 ATGGGTGGCTGTCTAAGCAAAGGTAAAGATTCAGAGCCAGCAAACAATGGTTACAGACATGCTGGCTCTGCTGGTGTGCACAACCAGAAGACCACTGAATCCAAAGTCAACCAATCAAGAGCACATGCTCACCAACCTTACCACTTACCTGAAAAGCATGCTGCATCCACTCAGAGCCAAACAGTGCCTCAGACACCATGGAAGCCTTCTGTTCCCGCCCCAAGCCCAAAGCCTTTTCCCAAGCAAGACACCATCCTTGGGAAACAATTTGAGGATGTGAAGCAGTTCTACACACTTGGGAAAGAACTGGGAAGAGGGCAGTTTGGGGTGACCCATCTGTGCACTGAGAACTCAACTGGGTTGCAGTATGCCTGTAAGTCAATCTCAAAGAGGAAACTTGTTAGCAAATCTGACAAGGAGGACATCAAGAGGGAGATTCAGATCATGCAGCATTTGAGTGGTCAACCCAACATTGTTGAGTTCAAGGGTGCTTATGAGGACAAGCATTCTGTCCATGTTGTGATGGAGCTGTGTGCTGGTGGTGAGCTCTTTGATAGGATTATTGCAAAAGGGCATTACAGTGAAAGAGCTGCTGCTTCAATATGCAGACAAATTGTTAATGTTGTTCATATCTGCCATTTCATGGGTGTGATGCATAGGGATCTGAAGCCAGAGAATTTCTTGTTGTCTAGTAAGGGTGAAAATGCACTTCTCAAGGCAACAGATTTTGGCTTGTCAGTTTTCATTGAAGAAGGAAAGTTGTATCGGGATATAGTTGGGAGTGCATATTATGTTGCTCCGGAAGTTCTAAAGCGCAGATGTGGGAAGGAAATAGATATATGGAGTGCAGGAGTTATATTATATATCTTACTTAGTGGTGTCCCTCCATTTTGGGCAGAGACTGAAAAGGGAATATTTGATGCCATATTGGAAGGTCATATTGATTTTGAAAGTGACCCTTGGCCTAAAATATCAAACAGTGCCAAGGACCTTGTTCGTAAGATGCTTATACAAGATCCAAAGAAACGCATAACTTCTGCTCAGGTTCTAGAGCACCCATGGATTAGAGAAGATGGAAATGCTTCTGACAAGCCAATAGACAGTGCAGTCCTTTCCCGGATGAAACAATTCAGAGCTATGAATAAACTAAAGAAACTTGCCCTGAAGGTCATCGCTGAGAATATGTCTGAGGAAGAGATCCGAGGTTTGAAGGCAATGTTTACAAATATGGACACTGATAATAGTGGTGCAATCACCTACGAAGAACTAAAGGCTGGATTGCAAAGACTTGGTTCAAAGCTTACAGAAGCTGAAGTCAAGCAGCTTATGGATGCCGCTGATGTAGATGGAAACGGTACCATTGACTACATAGAATTCATCACTGCTACAATGCATAGACACAAGTTAGAAAGAGATGACCAACTTTCCAAGGCCTTCCAATATTTTGATAAAGACAACAGTGGGTTCATCACAAAAGATGAACTGCAAACGGCCATGACAGAATATGGCATGGGTGATGAAGCCACAATCAAAGAAATAATATCTGAAGTTGACACAATTATATCTGAAGTGGATACAGATAATGATGGTAGGATCAACTATGAAGAGTTCTGTGCAATGATGAGGAGTGGAACCCAACACCAAGGCAAGCTATTCTAA 1659 0.4286 MGGCLSKGKDSEPANNGYRHAGSAGVHNQKTTESKVNQSRAHAHQPYHLPEKHAASTQSQTVPQTPWKPSVPAPSPKPFPKQDTILGKQFEDVKQFYTLGKELGRGQFGVTHLCTENSTGLQYACKSISKRKLVSKSDKEDIKREIQIMQHLSGQPNIVEFKGAYEDKHSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKGENALLKATDFGLSVFIEEGKLYRDIVGSAYYVAPEVLKRRCGKEIDIWSAGVILYILLSGVPPFWAETEKGIFDAILEGHIDFESDPWPKISNSAKDLVRKMLIQDPKKRITSAQVLEHPWIREDGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENMSEEEIRGLKAMFTNMDTDNSGAITYEELKAGLQRLGSKLTEAEVKQLMDAADVDGNGTIDYIEFITATMHRHKLERDDQLSKAFQYFDKDNSGFITKDELQTAMTEYGMGDEATIKEIISEVDTIISEVDTDNDGRINYEEFCAMMRSGTQHQGKLF* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0894 552 ProSitePatterns EF-hand calcium-binding domain. 447 459 IPR018247 -
Dod05g0894 552 SMART serkin_6 97 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0894 552 Gene3D Transferase(Phosphotransferase) domain 1 183 363 - -
Dod05g0894 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Dod05g0894 552 ProSiteProfiles EF-hand calcium-binding domain profile. 512 547 IPR002048 GO:0005509
Dod05g0894 552 MobiDBLite consensus disorder prediction 1 82 - -
Dod05g0894 552 SUPERFAMILY Protein kinase-like (PK-like) 96 362 IPR011009 -
Dod05g0894 552 ProSiteProfiles EF-hand calcium-binding domain profile. 434 469 IPR002048 GO:0005509
Dod05g0894 552 ProSitePatterns Protein kinases ATP-binding region signature. 103 126 IPR017441 GO:0005524
Dod05g0894 552 Gene3D - 364 548 - -
Dod05g0894 552 Pfam Protein kinase domain 97 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0894 552 Gene3D Phosphorylase Kinase; domain 1 99 182 - -
Dod05g0894 552 CDD STKc_CAMK 96 354 - -
Dod05g0894 552 ProSitePatterns EF-hand calcium-binding domain. 483 495 IPR018247 -
Dod05g0894 552 SMART efh_1 516 544 IPR002048 GO:0005509
Dod05g0894 552 SMART efh_1 474 502 IPR002048 GO:0005509
Dod05g0894 552 SMART efh_1 438 466 IPR002048 GO:0005509
Dod05g0894 552 SMART efh_1 402 430 IPR002048 GO:0005509
Dod05g0894 552 ProSiteProfiles EF-hand calcium-binding domain profile. 398 433 IPR002048 GO:0005509
Dod05g0894 552 MobiDBLite consensus disorder prediction 52 66 - -
Dod05g0894 552 CDD EFh 474 542 IPR002048 GO:0005509
Dod05g0894 552 Pfam EF-hand domain pair 403 463 IPR002048 GO:0005509
Dod05g0894 552 Pfam EF-hand domain pair 473 542 IPR002048 GO:0005509
Dod05g0894 552 ProSitePatterns EF-hand calcium-binding domain. 525 537 IPR018247 -
Dod05g0894 552 ProSiteProfiles EF-hand calcium-binding domain profile. 470 505 IPR002048 GO:0005509
Dod05g0894 552 ProSiteProfiles Protein kinase domain profile. 97 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0894 552 Coils Coil 420 440 - -
Dod05g0894 552 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 547 - -
Dod05g0894 552 MobiDBLite consensus disorder prediction 25 41 - -
Dod05g0894 552 SUPERFAMILY EF-hand 395 541 IPR011992 -
Dod05g0894 552 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-LIKE 44 547 - -
Dod05g0894 552 ProSitePatterns EF-hand calcium-binding domain. 411 423 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0894 Dod-Chr5 16260089 16266912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0894 1 552 EF-hand Containing Proteins AT3G20410 73.561 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod05g0894 Pkinase 9.9e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0894 K13412 - gmx:100798651 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0465 02 6125723 6130949 Dod05g0894 05 16260089 16266912 PCT