Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0834 ATGTCTACAGCGCCTTCCCCCTGGGCTTCGCCGACCCCCACTTCGCCGCCGGCCACCAACACAACTTCTCCTTCACTGCCCTCCAACTCTGTTCCACCGCCATCCTCTGCTTCCCCTCCACCGCCAACAACCACGCCCTCAACTTCTCCGCCACCGGCGTTTCCTACGCCTCCATCTGACGCCAAAACGCCTCCCTCCCCGGCGACTCAGCGCTCGCCTCCTCCTCCATCGGGCTCAGGCTCGCCTTCAACTCCCTCTCCGCCTTCCTCCACGTCCTCCCTGCCGAAGTCGTCGTCGTCGAGTACTCCGGCCGGCGTCTTTGTGGGAGTCGCCGTGGGGGCTGTGGCGATTATTCTGGTGTTGAGCATTTTGTGCTTTTGTTGTAGGAAGAAGAAAAGACGCGATGACCAACACAACGCGCCGCCTCAGGGACCTAAAGATCAAGGCCGGAACGCTGCCACCCACCAAACCAACGACTCCTATGATGTTTTCCTCAGTTTCTGTGGCCCAGACACCCGCTACTCCTTCACAGGTTCTCTCTATGATGCTTTGACAAGTAAGGGATTCAAGGTCTTCATGGATGATCAGGCCATGAAGCCTGGGGACCGAATCTCACAAACTCTGGTCAATGCCATTCGACAGTCAAGGATTTCGATCGTTGTCTTGTCTCAGGACTACGCGTCTTCCACGTGGTGTCTTGATGAGCTTGTCCAGATCCTTGAGTGTATGAGACTGAAGAACCAGCTGGTATGGCCAATCTTCTACAAAGTGGCACCCTCCGATGTGAGGCTTCAGAGGAAGAGTTATGCCGAAGGCATGGCTAAACATTACAAAAAGTTCGGAAAGGGATCCCAGGAGGTGCAGAAATGGAGAACAGCCTTAACTGAAGTCGCTGGCGTGGAAGGATGGCCTAACACAGCTGGCCGGTACGACCATGAATTGATTAAAGAGATTGTGAAAAGGGCTAGAACTACACTAAAGCGTGAACAATTAGATGTTGGAGAACACATGATCATACATCAAAGTTGCATAGAAAAAGTAAAGTCACTTCTAGACATTGAATCTCATCAAACGCCTTGCATGTTGGGAATTCATGGAATAGGTGGAATGGGAAAAACAACACTTGCTAAGGCACTGTATAACTTGATAAATCATCAATTTGACTATGCAATTTTCCTTGAAGATGTTAGAGAAAAATCGAGTAGCCCGGGCCTAGTATGTCTCCAAGAGGAAATTTTATCTAAGTTTGAAGGGGGAAAAAAGAAGTTAGGTGGTGTTAGTGAAGGTGTCACTATATTGAAAGACAACTTTCAGGGTCAAAGAGTTCTTTTATTCCTCGATGATGTTGATGAGAAGGACCAGTTAGAAAAGCTAGCAGGAAACTGTAATTGGTTTGGCTCAGGTAGTCGGATTATCATAACAACAAGGGATAAAAATGTTCTAGATCACGGTGATGTTGAAAAGAGATTTGAAATGAAGGGGTTAAATGATGATGAAGCTCTTCAACTCTTCTGTTTGAAAGCATTCAAAGACAGTCAACCTCCAATGAACTATGAAGAGGTGTCAAAACGTGTTGTTCAATATGCTCGTGGCCTACCATTGGCTCTAAAGGTAATAGGGTCCCATTTTTTCAAAAGATCTGTCAAGGCCTGTGAAGATGCATTAAAACAATATGATAAGATTCCAGACAAGAAGATACAAGGAATACTCAAGATAAGTTATGATTGCTTAGATGACTCTGCAAAGTCTATTTTTCTTGATATTGCTTGTTTTTTCAAGGGGAAGAGGTTGGATTATGTTGACCAGGTATGGGAGAAATGTGACTTTGTCCCATCAAACAATGTTGGAATACTAGAGGAGAAGTCTTTGATTACTATTGAAAATGGTGAATTGCGGATGCATGATTTAATACAAGACATGGGTAAAGAGATAGTTAGAACGGAAAATCCTAACAATCCTGGTAATCGCAGCAGATTATATTTTCATCAAGATGTTCTCAACGTTTTGAGAGAAAATTTGGGAAGCAATGAAATTAGAGGAATTATGTTGGATCCCCCAGAAGAAGAAGAAGTCAATTGGAATGACAATGCCTTTAAAAAAATGACTAAACTTCGAATTCTCATTATTCGAAAGACACACTTTACACAAAATCTTGATTATTTGCCAAATAGTCTACTGCTACTCGATTGGAAAGGGTACCCTTCAAAATCACTCCCTTCATGTTTTGATCAAATTGTTGTTCTCAATTTACCTTATAGTCATCTCACTTTCGAAGAAGCAGAGTCATTTCAGAAGCTGGAGCATTTGACTTGCTGTGATTTCTCAATGTGTAAATATATAACTCGTTTCCCTGACGTGTCTGAAGTTCCAAATTTGAGCGAACTTGATCTTAGTGGATGTACAAACCTGACTGCCATTCATCACTCTGTTGGATTTCTTCAAAACCTTAAACGTTTAAATGCATATTACTGCGAGAAGCTCCAAGATCTTCCATCGATGATGTTGTTGCCTTCTCTCCAAGTGCTTATCCTCACTCACACAAGTATTGCATCCATCCCTGAAGTGTCTGGAGTTCCAAATTTGAGCGAACTTGATCTTAGTGGATGTACAAACCTGACTGACATTCATCACTCTGTTGGATTTCTTCAAAACCTTAAAAGTTTAAGTGCATTTCGCTGCGAGAAGCTCAAAGATCTTCCATCTATGATGTCGTTGCCTTCTCTCCAAGATCTTGTCCTCACTAACACAAGTATTTCATCCATCCCTGACGTGTCTGGAGTTCCAAATTTGAGCCAACTTGATCTTAGTGGATGTAGAAACCTCACTGCCATTCATCACTCTGTTGGATTTCTTCAAAACCTTAAACGTTTAGATGCATCTTGCTGTGGGAACCTCCAAGATCTTCCACCGACGATGTCGTTGCCTTCTCTCCAAGCTCTTGCCCTTAATCGCACAAGTATTGCATCCATCCCTGACATGTCTGGAGTTCCAAATTTGAGCCAACTTGATCTTAATGGATGTGGAAACCTCACTGCCATTCATCACTCTGTTGGATTTCTTCAAAACCTTAAACATTTAAATGCATCTCATTGCTACAGGCTCCAAGATTTTCCACCGAGGATGTGGTTGCCTTCTCTCCAACATCTTGACCTTAGTAGGACAAGTATGGAATCCTTCCCACACATAGAGGAAATGATGTGTGCGCCGTTAACAATTAGGTTGTATCAGACTCCAATTAAGGAGCTGCTGCTGGATTCCATTAGTAATCTTGCACGCAATGAAGTCTATGGACTAGAAGTTTTCATGCCAGGACTAACCGAGATTCCAGATTGGTTTGACTATCATTGTCAAGGAGGGATTGTGTCTTTCCAGGCTCGTCGAAAGTTTCCTCTTCTTGCTATTGCATACATCTTAGAGGAACATGCTCAATTAGCTCACATACACTTGTACATCAATGGTGACCACTGCAAAAGTCGTGATTGTCCACCTTCATCTCATCTTCTGTTGAGTAATGTTTCTTTTTTGGACTTCCAATGTCTGTTTTACGGTCCAGAGCGGTCTAGCCTCGACCCCTTTCTAGTGCATGAATGGAATTACGTGGAGATTAAATTTGAATGTGACCGTGGCAAAAGATGTAATAATGCTAATGTGTTATATCAATCGTTATGCAAGGTGGAGGAAGCACTACCACTCAGCATAGTTAAGGATAGTTGTGTAAAGACAAAATCAAAGACGTCAAATCATGGCACCAATGCTGCAAAAGCAAAGACTCAGTTAATTATGCCTGTGTTCGCCACAAGTTTCCTCCCAAGAATATATGGTGACTTCATGGTTCGAGCAATTCTTGTGAAGATGGTTGAAAAACTATAA 3870 0.4318 MSTAPSPWASPTPTSPPATNTTSPSLPSNSVPPPSSASPPPPTTTPSTSPPPAFPTPPSDAKTPPSPATQRSPPPPSGSGSPSTPSPPSSTSSLPKSSSSSTPAGVFVGVAVGAVAIILVLSILCFCCRKKKRRDDQHNAPPQGPKDQGRNAATHQTNDSYDVFLSFCGPDTRYSFTGSLYDALTSKGFKVFMDDQAMKPGDRISQTLVNAIRQSRISIVVLSQDYASSTWCLDELVQILECMRLKNQLVWPIFYKVAPSDVRLQRKSYAEGMAKHYKKFGKGSQEVQKWRTALTEVAGVEGWPNTAGRYDHELIKEIVKRARTTLKREQLDVGEHMIIHQSCIEKVKSLLDIESHQTPCMLGIHGIGGMGKTTLAKALYNLINHQFDYAIFLEDVREKSSSPGLVCLQEEILSKFEGGKKKLGGVSEGVTILKDNFQGQRVLLFLDDVDEKDQLEKLAGNCNWFGSGSRIIITTRDKNVLDHGDVEKRFEMKGLNDDEALQLFCLKAFKDSQPPMNYEEVSKRVVQYARGLPLALKVIGSHFFKRSVKACEDALKQYDKIPDKKIQGILKISYDCLDDSAKSIFLDIACFFKGKRLDYVDQVWEKCDFVPSNNVGILEEKSLITIENGELRMHDLIQDMGKEIVRTENPNNPGNRSRLYFHQDVLNVLRENLGSNEIRGIMLDPPEEEEVNWNDNAFKKMTKLRILIIRKTHFTQNLDYLPNSLLLLDWKGYPSKSLPSCFDQIVVLNLPYSHLTFEEAESFQKLEHLTCCDFSMCKYITRFPDVSEVPNLSELDLSGCTNLTAIHHSVGFLQNLKRLNAYYCEKLQDLPSMMLLPSLQVLILTHTSIASIPEVSGVPNLSELDLSGCTNLTDIHHSVGFLQNLKSLSAFRCEKLKDLPSMMSLPSLQDLVLTNTSISSIPDVSGVPNLSQLDLSGCRNLTAIHHSVGFLQNLKRLDASCCGNLQDLPPTMSLPSLQALALNRTSIASIPDMSGVPNLSQLDLNGCGNLTAIHHSVGFLQNLKHLNASHCYRLQDFPPRMWLPSLQHLDLSRTSMESFPHIEEMMCAPLTIRLYQTPIKELLLDSISNLARNEVYGLEVFMPGLTEIPDWFDYHCQGGIVSFQARRKFPLLAIAYILEEHAQLAHIHLYINGDHCKSRDCPPSSHLLLSNVSFLDFQCLFYGPERSSLDPFLVHEWNYVEIKFECDRGKRCNNANVLYQSLCKVEEALPLSIVKDSCVKTKSKTSNHGTNAAKAKTQLIMPVFATSFLPRIYGDFMVRAILVKMVEKL* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0834 1289 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 912 975 - -
Dod05g0834 1289 CDD AAA 338 493 - -
Dod05g0834 1289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 588 IPR027417 -
Dod05g0834 1289 SUPERFAMILY L domain-like 973 1176 - -
Dod05g0834 1289 MobiDBLite consensus disorder prediction 1 102 - -
Dod05g0834 1289 MobiDBLite consensus disorder prediction 27 83 - -
Dod05g0834 1289 Gene3D Ribonuclease Inhibitor 672 902 IPR032675 -
Dod05g0834 1289 Gene3D Ribonuclease Inhibitor 903 1072 IPR032675 -
Dod05g0834 1289 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 844 906 - -
Dod05g0834 1289 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 159 836 - -
Dod05g0834 1289 Gene3D - 324 488 IPR027417 -
Dod05g0834 1289 ProSiteProfiles TIR domain profile. 159 326 IPR000157 GO:0007165
Dod05g0834 1289 Pfam NB-ARC domain 343 579 IPR002182 GO:0043531
Dod05g0834 1289 Gene3D - 154 323 IPR035897 -
Dod05g0834 1289 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 982 1060 - -
Dod05g0834 1289 PRINTS Disease resistance protein signature 436 450 - -
Dod05g0834 1289 PRINTS Disease resistance protein signature 529 543 - -
Dod05g0834 1289 PRINTS Disease resistance protein signature 361 376 - -
Dod05g0834 1289 PRINTS Disease resistance protein signature 787 803 - -
Dod05g0834 1289 MobiDBLite consensus disorder prediction 134 154 - -
Dod05g0834 1289 SMART LRR_typ_2 789 813 IPR003591 -
Dod05g0834 1289 SMART LRR_typ_2 1043 1065 IPR003591 -
Dod05g0834 1289 SMART LRR_typ_2 836 859 IPR003591 -
Dod05g0834 1289 SMART LRR_typ_2 905 928 IPR003591 -
Dod05g0834 1289 SMART LRR_typ_2 974 997 IPR003591 -
Dod05g0834 1289 SMART LRR_CC_2 858 887 IPR006553 -
Dod05g0834 1289 SMART LRR_CC_2 1020 1052 IPR006553 -
Dod05g0834 1289 SMART LRR_CC_2 951 983 IPR006553 -
Dod05g0834 1289 SMART LRR_CC_2 789 816 IPR006553 -
Dod05g0834 1289 SMART LRR_CC_2 927 950 IPR006553 -
Dod05g0834 1289 Gene3D - 494 578 IPR042197 -
Dod05g0834 1289 SUPERFAMILY Toll/Interleukin receptor TIR domain 157 303 IPR035897 -
Dod05g0834 1289 SUPERFAMILY L domain-like 632 991 - -
Dod05g0834 1289 SMART till_3 160 300 IPR000157 GO:0007165
Dod05g0834 1289 MobiDBLite consensus disorder prediction 84 102 - -
Dod05g0834 1289 Pfam TIR domain 161 326 IPR000157 GO:0007165
Dod05g0834 1289 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 982 1060 IPR044974 GO:0006952
Dod05g0834 1289 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 844 906 IPR044974 GO:0006952
Dod05g0834 1289 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 159 836 IPR044974 GO:0006952
Dod05g0834 1289 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 912 975 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0834 Dod-Chr5 13929746 13937938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0834 362 968 WRKY Transcription Factor Family AT5G45050 34.303 5.81e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0834 - - aprc:113846827 903.279