Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0833 ATGAAGAACTTTGCTCTTTATGCTTGTTTACTCCTTGTTGTTAGCTTTTTGGTGTTGTTCCCTTCTGGCAAAGCCAGCCAGGCCGATAAACTTGATGAGTTGATTCTATCCAGGAGCTCACAGAATCCTCCTGTGAAGCTTTCTTGGGCAGAGGAAGATGCATTATTGAAAGCGCATTCTTCTGCTAATTATTATGTTTCATCCCAAGATGGGCTAAGGCAAGCCGACAAGATTGCTGCATTGCCTGGCCAGCCCTATGGGCTGAATTTTGACCACTATTCTGGGTATGTCACAGTTGATCCAGCTGCTGGGAGATCACTTTTCTATTATTTTGTGGAGTCTCCTTATAGCTCTATAAATAAGCCTTTAGTGCTGTGGCTCAATGGAGGACCTGGTTGCTCATCACTGGGATATGGGGCTTTTGAGGAGCTGGGACCATTCAGAGTAAACTCTGATGGCAAAACACTATTTCGTAACCAATATTCATGGCATGAAGTGGCAAACGTGCTCTTCTTGGAATCCCCTGCTGGAGTGGGCTTCTCCTACTCAAATAATGCCTCTCAAAATGACCAGTCTGGGGATAAGGCTACTGCCAAGGATGCCTATGTCTTCCTTCTCAACTGGCTAGAACGGTTCCCACAGTACAAAACCAGGGATTTTTACATAACTGGAGAGAGCTATGCTGGTCATTATGTGCCTCAACTTGCATACACTATCCTACTGAACAACATTTTCAAACACCAAACCATTATTAACCTCAAAGGCATTGCTATAGGGAATGCTTGGATTGATGATGCCACAAATACAAAAGGGCTATTTGATTACCTTTGGACCCATGCTTTGAGCTCAGATCAAACCCATGAATTGATTGAGCAATATTGCGACTTCACTTCTGAAAATCCTTCGCTTATATGTATCAATGCAACAAGGAGGGCCTTAGTTGAGAAAGGAAACATAGACTTCTATAATATCTATGCTCCACAGTGTCATGGCATGTCTCCGAAAAATGGTGCTACCGGTTCTGTAAATGATTTTGACCCTTGCTCTGATTACTACGTGGAAGCTTATCTAAATAGGCCGGAGGTCCAACTTGCTATTCATGCAAAACCTACAAATTGGACCCACTGCAGTCCTTTGGCCTGGACGGACAGCCCAACTACCATCCTGCCCGTCATCAAGTATCTCATAGCCAATGGTATTAAAGTGTGGATATATAGTGGTGACACAGATGCAAGAGTGCCAGTCACAAGCTCCAGATATTCAATCGATGCCCTCAAGCTCCCTATCCAGGCTGCTTGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATATGTGGAGCAATATAAAGGGGTGACATTTGTTACAGTAAGAGGAGCAGGACATCTTGTTCCAAGTTGGCAACCAAAACGGGCTTTGACCTTGATCATATCATTCCTCTACGGAACCCTGCCTCCTGCTACACCATGGAATGGATTCTAA 1482 0.4433 MKNFALYACLLLVVSFLVLFPSGKASQADKLDELILSRSSQNPPVKLSWAEEDALLKAHSSANYYVSSQDGLRQADKIAALPGQPYGLNFDHYSGYVTVDPAAGRSLFYYFVESPYSSINKPLVLWLNGGPGCSSLGYGAFEELGPFRVNSDGKTLFRNQYSWHEVANVLFLESPAGVGFSYSNNASQNDQSGDKATAKDAYVFLLNWLERFPQYKTRDFYITGESYAGHYVPQLAYTILLNNIFKHQTIINLKGIAIGNAWIDDATNTKGLFDYLWTHALSSDQTHELIEQYCDFTSENPSLICINATRRALVEKGNIDFYNIYAPQCHGMSPKNGATGSVNDFDPCSDYYVEAYLNRPEVQLAIHAKPTNWTHCSPLAWTDSPTTILPVIKYLIANGIKVWIYSGDTDARVPVTSSRYSIDALKLPIQAAWRPWYSGNEVGGYVEQYKGVTFVTVRGAGHLVPSWQPKRALTLIISFLYGTLPPATPWNGF* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0833 493 Gene3D - 348 379 - -
Dod05g0833 493 Gene3D alpha/beta hydrolase 73 331 IPR029058 -
Dod05g0833 493 Gene3D - 388 482 - -
Dod05g0833 493 SUPERFAMILY alpha/beta-Hydrolases 79 483 IPR029058 -
Dod05g0833 493 PANTHER CARBOXYPEPTIDASE 19 487 - -
Dod05g0833 493 ProSitePatterns Serine carboxypeptidases, histidine active site. 452 469 IPR033124 GO:0004185
Dod05g0833 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 487 IPR001563 GO:0004185|GO:0006508
Dod05g0833 493 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
Dod05g0833 493 Pfam Serine carboxypeptidase 82 480 IPR001563 GO:0004185|GO:0006508
Dod05g0833 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 452 465 IPR001563 GO:0004185|GO:0006508
Dod05g0833 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Dod05g0833 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 171 IPR001563 GO:0004185|GO:0006508
Dod05g0833 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 182 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0833 Dod-Chr5 13880657 13886135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0833 373 482 Calmodulin-binding Proteins AT2G22960 30.357 5.43e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0833 K16297 - gmx:100779407 811.601