Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0794 ATGGAAGCCACCTGCAGTGCTAATGCCGCACTTTCTTCTCAAGTCATGTCTTTTAATGGGAAGCGACTCCTTCATGAGATGGATTTCTTCGCAGAGAAGAAGAACAAGAGTGCTGAAATTGATGATAATCAAATGGTGCACCAAGTGGAGCTTCATGTAGATACTAGTTTAGATCTTCGTACAAAGAATTCCGGTAGCAGTAGAACAATTGCGGAAGATGGGGCATCGGAGAGCAGGGATGATTATAAAAGAAATGAGTTTGTAGCTTTGCTAGCTAAGTTGCACCATATGAATGCTGAAAATCAGCGGCTGAGAGAGCTGGTTGATAAGGTGAACAATGACTACAATGCCCTACACAAGCAACTTATGAAGCTGATGCAGAAGCAGCATCAACATGGGATTAATGGAGCCATACGCAAGAATGATAAGAAAAAAGCTTTGATTCCAAGGCAATTTTTGGACACGGGTTTAGCTGAAAAGGATGAGCCTTCACATCAATATTCAGAGGGAAATTTAAAACTGGCTGAAAGCAATAAGAGCATGGTTGACTGGATGGAATTTCATCAGAAGGCTTCCACCAGTGGAGACATTGTTTTGTTGGACACACCTAAGCTGGATTCTGGCAGGGATAGAAGGGATCATGAGAGCTCAGAGTGGCTCTCAAACAAAGTCACGAGGCTGAGTTCTTTCATGGATGGTGATCAAGCATCAGAAACCATGTCAATGATCAAGAGAGCTCGTGTATCTGTTCGAGCAAGATCAGAATCAAATCAATCAGTGATTCCAGATGGATGTCAATGGCGAAAATATGGGCAGAAGATGGCGAAAGGGAATCCGTGCCCACGAGCTTATTATCGTTGCTCAATGGGAACTGGTTGTCCAGTTCGGAAACAAGTACAGAGATGTGCTGAAGATCGCAGTGTGTTGGTCACAACATATGAAGGGCAGCACAACCACCCACTCCCTCCCACAGCCAAGGCAATGGCATCCACCACATCTTCAGCTGCATCATTGCTTCTTTCAGGATCAATACCAAGTGCAGATGGTGTAATGAACCCAAACATACTAGAAAGTGCATCACTTTCTTGCTCACAGAACATGGCAACACTTTCGGCTTCAGCTCCATTTCCAACTATCACATTGGACCTCACCAAAAATTATACCAATTCGCAACATCTTCAAGGGGAACCGCAGGGCCAACTTAGCCTCCTACACCCACATTTGGCTCAGAAGTTTATGCCAATGCCAAACATTTTTGGGAAGGCTGAGGGAATGGAAACAACATCATTTGCAGATACGAGTACAACTAATGCAGCAACGGCTGCTATCACTGCAGACCCGAATTTCACAGCAGTTCTTGTGGCTGCCATATCATCTATCATTAGGAGTTCACATCCAAATAATGATGGTATCAACAGTAAAAGTGGCGGAGACCAGCAGTGCAATAACACAGACTAA 1458 0.4417 MEATCSANAALSSQVMSFNGKRLLHEMDFFAEKKNKSAEIDDNQMVHQVELHVDTSLDLRTKNSGSSRTIAEDGASESRDDYKRNEFVALLAKLHHMNAENQRLRELVDKVNNDYNALHKQLMKLMQKQHQHGINGAIRKNDKKKALIPRQFLDTGLAEKDEPSHQYSEGNLKLAESNKSMVDWMEFHQKASTSGDIVLLDTPKLDSGRDRRDHESSEWLSNKVTRLSSFMDGDQASETMSMIKRARVSVRARSESNQSVIPDGCQWRKYGQKMAKGNPCPRAYYRCSMGTGCPVRKQVQRCAEDRSVLVTTYEGQHNHPLPPTAKAMASTTSSAASLLLSGSIPSADGVMNPNILESASLSCSQNMATLSASAPFPTITLDLTKNYTNSQHLQGEPQGQLSLLHPHLAQKFMPMPNIFGKAEGMETTSFADTSTTNAATAAITADPNFTAVLVAAISSIIRSSHPNNDGINSKSGGDQQCNNTD* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0794 485 SMART WRKY_cls 261 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0794 485 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 11 468 IPR044810 GO:0003700
Dod05g0794 485 Pfam WRKY DNA -binding domain 263 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0794 485 SUPERFAMILY WRKY DNA-binding domain 257 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g0794 485 MobiDBLite consensus disorder prediction 464 485 - -
Dod05g0794 485 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 11 468 - -
Dod05g0794 485 Gene3D WRKY domain 245 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g0794 485 ProSiteProfiles WRKY domain profile. 256 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0794 485 Coils Coil 94 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0794 Dod-Chr5 12625159 12629059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0794 11 472 WRKY Transcription Factor Family AT1G62300 41.667 1.97e-99 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod05g0794 WRKY 6.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0794 - - gmx:100804246 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0794 05 12625159 12629059 Dod08g0258 08 2798319 2801647 PCT