Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0770 ATGCTACTAGCAAAGTTTTCTAATGCTTTGGATTGTTCTAATCCACCAAAAGTCATTGACGTGAACCAGTCAGGCGAGGGAGGAAGCTTCAAAACCATCCAAGGTGCCATTGAATCTGTCCATAAACCAAACACTCAATGGACTCACATCCGAATCGCTCCAGGAACTTACACAGAAAAAGTCATTATCGCCTACAATAGGCCATGCATTTTTCTTGAAGGAGCTGGTAGTAACTCCACCATCATTCAGTGGAATGACCATGATAGGATGTCTAGTAGCGCCACTTTTGAATCATCAGCAAGTGATGTTGTAGCAAAAGGCATTGCATTTGAGAACATATATAACATTCCTTATCGACCTGATAAAGGAATTTTACCAGCATTGGCAGCAAAATTACAAGGGGACAAAAATGCCTTTTACAATTGTTCCTTTATAGGGGTGCAAGATACCTTATGGGATAATAGAGGACGCCATTATTTCCGCTATTGCTACATTCAAGGTGGAACAGACTTCATATTCGGAGATGGTCAATCCATCTATGAGGAAAGTGTAATCAACTTTACAATGGGGGCAAATGGACCTAAGGTAGATGGTGTTATAAGTGCACAAAAACGAATGACAATGGACTCTCCAACAGGGTTTGTGTTTAAGAAATGTAACATAACTGGGGTTGGTGCAAAGGCCGAGCTTGGGAGAGCATACGGACCATTTTCCAGAGTTATCATTGCATATTCCTATTTGTCAGACGTGGTTCGACCAGAGGGTTGGGCTGCTTGGGGTTACACTGGACATGAAGCAAATCTTACATATGTAGAGGAGCATAATTATGGACCAGGGGCAGACAACTCTAAGCGCGTGAAATGGACCAAAGATATGGACTCAAACGAGCTCAACAAATTCTTGAATATCTCTTATATAGACAATGAAGGATGGATTGTCAAACAACCCATTAGTTACTAA 960 0.4135 MLLAKFSNALDCSNPPKVIDVNQSGEGGSFKTIQGAIESVHKPNTQWTHIRIAPGTYTEKVIIAYNRPCIFLEGAGSNSTIIQWNDHDRMSSSATFESSASDVVAKGIAFENIYNIPYRPDKGILPALAAKLQGDKNAFYNCSFIGVQDTLWDNRGRHYFRYCYIQGGTDFIFGDGQSIYEESVINFTMGANGPKVDGVISAQKRMTMDSPTGFVFKKCNITGVGAKAELGRAYGPFSRVIIAYSYLSDVVRPEGWAAWGYTGHEANLTYVEEHNYGPGADNSKRVKWTKDMDSNELNKFLNISYIDNEGWIVKQPISY* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0770 319 SUPERFAMILY Pectin lyase-like 15 312 IPR011050 -
Dod05g0770 319 Gene3D - 18 319 IPR012334 -
Dod05g0770 319 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 316 - -
Dod05g0770 319 Pfam Pectinesterase 23 307 IPR000070 GO:0030599|GO:0042545
Dod05g0770 319 PANTHER PECTINESTERASE 10 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0770 Dod-Chr5 12087875 12092179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0770 29 312 Carbohydrate Esterase AT1G05310 38.488 3.04e-62 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0770 - - lang:109339855 424.476