Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0744 ATGGTTATGGTGTCGATGACCTTGGTACAAGATGTCGTGTGGAACTTGGCTCCTGAACACGAGCAAGTGGTCCCCATATCACTCTTTGTGGCTGTTCTCTGCCTCTGTTTGGTCATTGGTCACGTGCTTGAAGAGAACCGATGGGTTAATGAATCCATTGTTGCCATTGTAGTTGGATGCATAGCTGGAAGCATAATCTTATTAATCACCAAGGGAAAAAGTTCTCACATTCTTACCTTTGATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCCGGATTTCAGGTGAAGAAGAAACAGTTCTTCCACAACTTCTTAACCATCATGCTGTTTGGGGTGATCGGTGTTTTCATTTCAGCATCTGTGATCACAGGCGGCAGCTGGTGGCTTTTTCCTAAGTTCAATTTTCTTGGCCTGACCGGGAGGGATTATCTTGCTATAGGAACAATTTTCTCATCAACAGACACAGTGTGTACACTGCAGGTTCTCCATCAAGATGAAACTCCTTTACTATACAGCCTAGTCTTTGGAGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAGAAGCTTGGTGTTTCAAGACCTGGTGGCAGGACACTCCGTGTCATTGGTGATTTCTTGTATCTATTCTCAACAAGCACTGCTCTCGGAGTATTAGCTGGACTTCTCACAGCATATATCTTGAAAGGATTAAGCTTTGGCAGACATTCAAGTGTTCGTGAAATTTCATTGATGATTTTAATGGCATACCTATCCTACATGTTGGCAGAGCTACTTGAACTAAGCGGCATCCTCACTGTTTTCTTTTGTGGAATACTAATGTCACATTATGCATGGCATAATGTAACTGAAACCTCAAGAATCACAACCAGGCATGTGTTTGCAACAATGTCGTTTATCACAGAAACATTCATATTTCTTTACGTGGGCATGGATGCACTTGACATTGAAAAGTGGAGAATGACCAAATTAAGTTTTGGAAATTTGATGGGAATCTACAGCTGCATAATCTTTCTGATATTGCTTGGGCGGGCCGCATTTATTTTCCCTCTCTCAGCTTTTGCCAATTATATGAATAGGCGTGCTGAGAGAGAATCAAGTATCACGTTCAAACATCAGATAATCATTTGGTGGGCTGGTCTAATGAGGGGTGCAGTCTCCATTGCTTTAGCTTTCAAACAGTTCACATTATCTGGTGTTACTTCTGATCCAGTTTATGCGACAATGATTACCAACACCATTATTGTTGTCCTTTTCAGCACACTGGTGTTTGGTTTTCTAACAAAGCCACTTATTAGATATCTGCTTCCACCCCACAGTGGAACAAGGAGAAACATCAGCCATGAAGAATCAGGGCCACCAGTTGAGGACTTGAATCTGCCTTTGCTATCCCTTGAGGAGTCAGCAGCAACCAACATCAGCCGTGCAAAGGAAAGTTTTTCCATGTTTATGGAAAGTCCAGTGTACACCACACATTACTATTGGAGAAGGTTTGATGATGCATACATGAGGCCTATATTTGGGGGACCTCATGGCAACCGGTCACAGTGCTAG 1587 0.4228 MVMVSMTLVQDVVWNLAPEHEQVVPISLFVAVLCLCLVIGHVLEENRWVNESIVAIVVGCIAGSIILLITKGKSSHILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISASVITGGSWWLFPKFNFLGLTGRDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLGVSRPGGRTLRVIGDFLYLFSTSTALGVLAGLLTAYILKGLSFGRHSSVREISLMILMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTETSRITTRHVFATMSFITETFIFLYVGMDALDIEKWRMTKLSFGNLMGIYSCIIFLILLGRAAFIFPLSAFANYMNRRAERESSITFKHQIIIWWAGLMRGAVSIALAFKQFTLSGVTSDPVYATMITNTIIVVLFSTLVFGFLTKPLIRYLLPPHSGTRRNISHEESGPPVEDLNLPLLSLEESAATNISRAKESFSMFMESPVYTTHYYWRRFDDAYMRPIFGGPHGNRSQC* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0744 528 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod05g0744 528 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod05g0744 528 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod05g0744 528 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Dod05g0744 528 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Dod05g0744 528 PANTHER SODIUM/HYDROGEN EXCHANGER 7 524 - -
Dod05g0744 528 PANTHER SODIUM/HYDROGEN EXCHANGER 7 524 IPR018422 GO:0006812|GO:0015299|GO:0016021
Dod05g0744 528 Gene3D - 145 197 - -
Dod05g0744 528 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 25 457 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0744 Dod-Chr5 11516206 11529427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0744 4 528 Antiporters AT5G55470 71.456 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0744 - - gmx:100813332 885.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0744 05 11516206 11529427 Dod05g0744 05 11516206 11529427 ECH