Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0743 ATGGCGTCTAGATTCTGGACCCAGGGTGGTAGTGATTCTGAGGAAGAGAGCAGTGACTATGATGAGGAGGAGGAGACGATGGTTGGTGAATCGGCTGCCAACCAAGACAACATTACTAGCAGGTACTTGCAGGACAATGCAAGTGACTCTGATGACTCTGATGGGCAAAAGCGTGTTGTCCGGTCTGCGAAAGATAAGCGGTTCGAGGAGATGGCTACTACTGTCGATCAGATGAAGAATGCCATGAAGATCAACGACTGGGTGAGCTTGCAGGAGAGCTTTGATAAGATCAACAAGCAGCTTGAGAAGGTCATGCGTGTTACTGAGTCTGACAAGGTCCCCAATCTCTACATTAAAGCCCTTGTGATGCTGGAGGATTTCCTGGCTCAGGCTTTGGCCAATAAGGATGCCAAGAAGAAGATGAGTAGTAGCAATGCCAAGGCGCTGAACTCTATGAAGCAGAAGTTGAAGAAGAATAATAAGCAGTATGAGGACTTGATTAACAAGTGCAGGGAGAATCCTGAGAGTGAAGAGGAGAAAGAAGAGGAGGAGTCAGAGGAAGAGTATGAGAGTGATGATGAGTTAATTGAGCCTGACAGATTATCAGTGAAATCAGCTTCGGAAAATGAAGATGAAAAGCCAGATGCTGGTGAAGCACCTTGGGACCAAAAGCTTAGCAAGAAAGACAGGCTTTTTGATAGACAATTTATGAAGGACCCTAGCAATATCACTTGGGACACGGTTAACAAGAAGTTCAAGGAGGTTGTGGCAGTTAGGGGCAGGAAGGGAACCGGAAGGTTTGAGCAGGTTGAGCAGCTTACCTTCCTGGCAAAAGTTGCTAAAACGCCTGCACAGAAGCTGGAAATTCTTTTTAGTGTGGTTTCTGCTCAGTTTGATGTTAAGCCAGGCTTAAGTGGGCATATGCCGATAAATGTCTGGAAAAAATGCGTGCATAACATGCTGGTCATTCTTGATATTCTAGTGCAGTACCCAAACATTGTGGTTGGTGATGCTGTGGAGCCAGATGAGAATGAAACTCAGAAAGGACCCGACTATAATGGAACAATTCGGGTTTGGGGTAATTTGGTTGCTTTCTTAGAAAGAATTGATGCTGAGTTTTTCAAGAGCCTGCAGTGCATTGATCCTCATACCCGTGAGTATGTTGAGAGACTGAGGGATGAGCCAATGTTTCTGGTTCTTGCTCAGAATGTTCAGGAATACCTTGAAAGGGTTGGGGATTTCAAAGCTTCTTCTAAGGTGGCCTTGAGGAGGGTTGAACTCATTTACTACAAACCACAAGAGGTGTATGACGCCATGAGAAAATTGGCTGAGCTGACAGAAGGAGATGATGAAGGTGGGGCTAGTGAGGAGAAAGGGTTTGAGGATACAAGAATTCCCACTGCATTTGTTGTTACGCCAGAGCTTGTGCCCCGCAAACCCTCGTTCCCTGAGAATAGCAGGACCCTTATGGATATATTGGTATCACTGATTTACAAATATGGAGATGAGCGCACTAAAGCACGGGCAATGCTTTGTGATATATATCACCATGCTCTTCTTGACGAGTTCTCAATAGCCCGTGATCTGCTGCTTATGAGCCATTTGCAAGACAGTGTTCAGCATATGGACATCTCGACACAGATACTTTTTAACAGGGCTATGTCACAGTTGGGTCTATGTGCTTTCCGGATTGGGCTGATTTCTGAAGCACATGGCTGTCTGTCTGAACTTTATTCTGGTGGAAGGGTGAGGGAGTTGCTTGCACAAGGTGTGGCCCAGAGTCGTTATCATGAGAAGACTCCAGAACAGGAAAGGTTGGAAAGAAGACGTCAGATGCCGTATCATATGCACATAAATCTTGAGCTCCTTGAGGCAGTGCATCTTATATCTGCTATGCTGCTTGAAGTTCCCAATATGGCGGCCAATGTCCATGATGCAAAGCGCAAGGTCATTAGTAAGACTTTCCGCCGCTTGCTTGAGGTCAATGAGAAGCACACATTCACTGGTCCACCTGAACATGTTAGAGATCATGTTATGGCTGCCACAAAGGCTCTTAGCAAGGGAGATTTCCACAAGGCATTTGAGATTATTGTGTCTCTTGATGTATGGAAATTTGTGAGAAATCGAGACACTGTGCTTGAAATGCTGAAGGACAAAATGAAGGAGGAGGCACTGAGGACATACCTCTTTACCTTCTCTTCAGCTTATGATTCTTTGAGCCTGGATCAACTCACAAAAATTTTTGACCTCTCTATTCCTCACACTCACAGCATTGTTAGTAAGATGATGATCAATGAGGAGCTTCATGCAAGCTGGGACCAGCCAACTGGGTGCATTGTTTTCCTGGACGTCGAGCACTCTAGGTTGCAGGCATTGGCATTCCAGTTGACAGAGAAGTTACCTATCCTGGCAGAGAGCAACGAAAGAGCAATGGAGGCAATGACAGGTGGTGGTGGATTGGATCTGTCCCAGAGGCGTAGGGATGGCCAGGACTATGCTGCTGCGGCTGCAGGTGGTGGAACAGCCTCTTTAGGTGGTAGGTGGCAGGACTTGTCCCTTTCCCAGCCAAGGCGATATGGTAGCGGAGGTGCAAGACCAACGGCTCTTGGCCAAGTAGCTGGGAGTGGATATTCGAGGGACCGAACGGGCCGAGGTCGAGGTTCAGGCCGGTATCAAGATGCTGCATACGGAGGTTCGGGGAGGACTACTCAAGGTGGTTCGGCATTGAGGGGACCCCATGGGGATGTATCATCTCGCATGGTTAGCCTTAAGGGAGTACGTGCTTGA 2787 0.4711 MASRFWTQGGSDSEEESSDYDEEEETMVGESAANQDNITSRYLQDNASDSDDSDGQKRVVRSAKDKRFEEMATTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESDKVPNLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKCRENPESEEEKEEEESEEEYESDDELIEPDRLSVKSASENEDEKPDAGEAPWDQKLSKKDRLFDRQFMKDPSNITWDTVNKKFKEVVAVRGRKGTGRFEQVEQLTFLAKVAKTPAQKLEILFSVVSAQFDVKPGLSGHMPINVWKKCVHNMLVILDILVQYPNIVVGDAVEPDENETQKGPDYNGTIRVWGNLVAFLERIDAEFFKSLQCIDPHTREYVERLRDEPMFLVLAQNVQEYLERVGDFKASSKVALRRVELIYYKPQEVYDAMRKLAELTEGDDEGGASEEKGFEDTRIPTAFVVTPELVPRKPSFPENSRTLMDILVSLIYKYGDERTKARAMLCDIYHHALLDEFSIARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRIGLISEAHGCLSELYSGGRVRELLAQGVAQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLISAMLLEVPNMAANVHDAKRKVISKTFRRLLEVNEKHTFTGPPEHVRDHVMAATKALSKGDFHKAFEIIVSLDVWKFVRNRDTVLEMLKDKMKEEALRTYLFTFSSAYDSLSLDQLTKIFDLSIPHTHSIVSKMMINEELHASWDQPTGCIVFLDVEHSRLQALAFQLTEKLPILAESNERAMEAMTGGGGLDLSQRRRDGQDYAAAAAGGGTASLGGRWQDLSLSQPRRYGSGGARPTALGQVAGSGYSRDRTGRGRGSGRYQDAAYGGSGRTTQGGSALRGPHGDVSSRMVSLKGVRA* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0743 928 MobiDBLite consensus disorder prediction 14 29 - -
Dod05g0743 928 SUPERFAMILY "Winged helix" DNA-binding domain 710 785 IPR036390 -
Dod05g0743 928 MobiDBLite consensus disorder prediction 157 176 - -
Dod05g0743 928 MobiDBLite consensus disorder prediction 137 156 - -
Dod05g0743 928 MobiDBLite consensus disorder prediction 47 65 - -
Dod05g0743 928 Coils Coil 146 173 - -
Dod05g0743 928 MobiDBLite consensus disorder prediction 1 65 - -
Dod05g0743 928 ProSiteProfiles PCI domain profile. 614 786 IPR000717 -
Dod05g0743 928 SMART PINT_4 715 799 IPR000717 -
Dod05g0743 928 MobiDBLite consensus disorder prediction 136 224 - -
Dod05g0743 928 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 926 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dod05g0743 928 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 867 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dod05g0743 928 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 1 926 - -
Dod05g0743 928 MobiDBLite consensus disorder prediction 30 46 - -
Dod05g0743 928 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 45 646 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Dod05g0743 928 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 715 799 - -
Dod05g0743 928 MobiDBLite consensus disorder prediction 855 928 - -
Dod05g0743 928 Pfam PCI domain 654 781 IPR000717 -
Dod05g0743 928 MobiDBLite consensus disorder prediction 177 195 - -
Dod05g0743 928 MobiDBLite consensus disorder prediction 196 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0743 Dod-Chr5 11508041 11512336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0743 1 928 Eukaryotic Initiation Factors Gene Family AT3G56150 69.379 0.0 1199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0743 K03252 - gmx:100779751 1517.29