Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0740 ATGACAGATAGAGAAGCTTACGGTCAAGTGAAAGAGCCTCGTCTTGTAGCCAGAAAATTGTTGGCCAGACCTCAACATGAAGGTGTTGGGGCAGTTGTTAGAAGAAGCATAGGAAGGTTTGATCTCAAGTACTTTGATCCGTTCCTTGCTTTGGATGAATTCTCGGTTACTGCTCCTGCTGGCTTTCCTGATCATCCACATAGAGGCTTTGAGACGGTCACATATATGTTGAAGGGGGCTGTAACACATGAAGATTTTGAAGGACATAAGGGAACAATAGAAGCTGGTGACTTGCAGTGGCTGACTGCAGGGAGAGGGATAGTTCACTCTGAAATGCCTGCGGCTCAAGGAACACAAAAGGGTCTGCAGCTGTGGATCAACCTGCCTTCCAAATATAAAATGATTCAACCAAGGTATCAGGAAGTGTTGAGCAAGGACATAGCAGAGGCTGTGGAAGGTGGTATCAAAGTTAGAGTTATAGCTGGAGAAGCCTTAGGGATAAAGTCTCCAGTATACACAAGAACCCCAACCATGTACTTGGACTTCACTCTCAAACCTGGAGCTCACTTGCAACAATCCATACCAAAACCTTGGAATGCTTTTGTCTACATCTTGGAAGGAGAGGGTGTCTTTGGGAACCTGAAATCTCACCCTGCAAACTCTCACCATATTCTTCTTCTTGGTCATGGAGATGGCATAGAGGCATGGAACAAATCTTCTAAGCTACTAAGGTTCATTTTGGTTGGAGGTGAACCACTTGGGGAACCTCTAGTGCAATATGGACCCTTTGTCATGAACACTCAAGAAGAGATTGACCAGACCATTGATGATTTTGAGAACTTTGCTAATGGATTTGAGAAAGCAAGACATTGGAGGTCTCAAAGCGCACTTAGTCTTGATTATTGA 906 0.4437 MTDREAYGQVKEPRLVARKLLARPQHEGVGAVVRRSIGRFDLKYFDPFLALDEFSVTAPAGFPDHPHRGFETVTYMLKGAVTHEDFEGHKGTIEAGDLQWLTAGRGIVHSEMPAAQGTQKGLQLWINLPSKYKMIQPRYQEVLSKDIAEAVEGGIKVRVIAGEALGIKSPVYTRTPTMYLDFTLKPGAHLQQSIPKPWNAFVYILEGEGVFGNLKSHPANSHHILLLGHGDGIEAWNKSSKLLRFILVGGEPLGEPLVQYGPFVMNTQEEIDQTIDDFENFANGFEKARHWRSQSALSLDY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0740 301 CDD cupin_pirin_N 31 129 - -
Dod05g0740 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Dod05g0740 301 PIRSF Pirin 12 292 IPR012093 -
Dod05g0740 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Dod05g0740 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Dod05g0740 301 CDD cupin_pirin_C 176 252 - -
Dod05g0740 301 Pfam Pirin 34 126 IPR003829 -
Dod05g0740 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Dod05g0740 301 PANTHER PIRIN-RELATED 8 297 IPR012093 -
Dod05g0740 301 PANTHER OS09G0484800 PROTEIN 8 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0740 Dod-Chr5 11431834 11435555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0740 13 289 Calmodulin-binding Proteins AT3G59220 59.857 1.07e-126 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0740 K06911 - gmx:100790637 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0740 05 11431834 11435555 Dod08g0222 08 2557541 2561170 PCT