Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0719 ATGCGGGTCCAAGTCATGCTCACGTGCATGTATCAAATCAAATCAAATACACCACAAACCCTAACCCGCAACTTCTTCATCTTCTCCTCCTCCTCAAGAGTTTCTCTGGTCAGTAGCCGCCAGCCAGAGCTAGCAGCAGCGGCACCACCAGTACCACCCTTCTCTTCTGCTGATTCCAAAATGGGTATCTCTCGTGATTCTATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGGAGGCAACCAGCAAACACAAAGCTGTCAAGCAACAAAACGGTTAGGAGGATTAGGGTTCGAGGTGGAAATGTGAAGTGGCGTGCTTTGAGGCTTGATACTGGGAATTACTCATGGGGAAGCGAAGCTGTGACTCGCAAGACGAGGGTTCTTGATGTTGTGTATAATGCATCCAACAATGAGCTTGTTCGAACTCAGACATTGGTCAAGAGTGCTATTGTCCAGGTTGATGCCGCACCTTTCAAACAGTGGTATTTGCAACATTATGGTGTTGACATTGGTCGCAAGAAGAAGGGTGCAACTTCTGCCAAGAAGGAAGGGGAGGATGCTGAAACTGCAACTGATGAGGTGAAGAAGAGTAACCATGTCTTGAGAAAGTTGGAAAAGCGTAAGCAGAACCGGGTGCTTGACCATCACATTGAAGAACAATTTGCAAGTGGTCGACTTTTGGCTTGTATCTCATCTCGGCCTGGTCAATGTGGTCGTGCTGATGGATACATATTAGAGGGGAAAGAGCTTGAATTCTACATGAAGAAGATTCAGAGGAAGAAGGGCAAGGGTGCTGCTTAA 837 0.4743 MRVQVMLTCMYQIKSNTPQTLTRNFFIFSSSSRVSLVSSRQPELAAAAPPVPPFSSADSKMGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKGATSAKKEGEDAETATDEVKKSNHVLRKLEKRKQNRVLDHHIEEQFASGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAA* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0719 278 MobiDBLite consensus disorder prediction 45 85 - -
Dod05g0719 278 MobiDBLite consensus disorder prediction 185 206 - -
Dod05g0719 278 Pfam Ribosomal protein S8e 65 257 IPR022309 -
Dod05g0719 278 Gene3D - 222 275 - -
Dod05g0719 278 Gene3D - 92 221 - -
Dod05g0719 278 TIGRFAM eS8: ribosomal protein eS8 61 259 IPR001047 GO:0003735|GO:0005840|GO:0006412
Dod05g0719 278 MobiDBLite consensus disorder prediction 71 85 - -
Dod05g0719 278 ProSitePatterns Ribosomal protein S8e signature. 71 90 IPR018283 GO:0003735|GO:0005840|GO:0006412
Dod05g0719 278 PANTHER 40S RIBOSOMAL PROTEIN S8 61 278 - -
Dod05g0719 278 Coils Coil 199 219 - -
Dod05g0719 278 CDD Ribosomal_S8e_like 65 257 - -
Dod05g0719 278 PANTHER 40S RIBOSOMAL PROTEIN S8 61 278 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0719 Dod-Chr5 11010498 11013319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0719 61 266 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.466 7.12e-128 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0719 K02995 - gmx:100527325 402.519