Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0711 ATGGACGCCGGCGATTACCACTCCGGTTCGGAGCTCCGGCGAACCAGTCCTGCCGCTGACGCCGAATTCCAATCGGAGGATCCGAATCGATCGTGGTCGCGGCCCGATTCCTCCGCCGGAGCCACATCCTCCTTCACCGCCGCCGCCGCCTCCACCGGCGGAGCCAGGTACAAGCTCATGTCGCCGGCGAAGCTCCCGATCTCGAGGGGGCCGTGTGTGACGGTTCCTCCTGGGTTCAGTCCGACGTCGTTTCTCGAGTCCCCCGTGCTGCTCTCCAACATGAAGGTTGAACCTTCACCAACTACAGGTTCCCTTTCTAAGCTTCGTCAAATAGTACATGGTTCTGTGACTTCTGCTGCATCCACTACATTTCCTGTATCTACTGTATGCTTCAATACCAATACTGTTGATGACAGAAAATCCAGCTTCTTTGAGTTTAAACCGCACAATAGATCAAATATGGTTCCTGCCGAATTTGACAACCATGTAAATGAAAAATCTACTCAAATAGATGGTCAAGGAAATTCTCATTCTTTTCCCTCATCACCAGCAGTCAAAAGTGAGGCAGCAGTACCTTCAAATGAATTAAGTCTATCATCACCTGTTCAAATGGTTAGTTCAGGGGCTAGTGCTCATGTTGAAGTCGATTTGGACGAATTTAACCACAAGGGCAACACAGCCGCTGGGCTTCAAGCATCAAAAGTTGAGGGTAAGAGCAGTGGACTTTCAGTTGCATCTGAGAGAGTATCTGATGATGGATACAATTGGAGAAAATATGGGCAGAAACATGTTAAAGGAAGTGAATTTCCGCGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTGAAGAAACTATTTGAACGCTCTCATGATGGGCAAATCACTGAGATAATTTACAAGGGAACCCATGATCATCCTAAACCTCAACCAAACCGCCGATACTCTGCTGGAAGTATTATGTCTATGCAAGAAGAGAGATCTGATAAGGCTTCTTCTTTGGCTGGTAGAGATGACAAAGCATCCAGTATATATGGCCGGGTTTCTCATCCTGCTGAGCCCAGTAGTACTCCAGAGCACTCTCCTGTAACAACAAATGGTGATAGTCCAGAGGGTCTGGGGTTTGTGTCAAACCGGATTAATGATGAGATTGATGACGATGATCCCTTCTCAAAGCGAAGAAAAATGGATCTTGGAAATGCTGATATCACTCCTGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTCTGAGTGAGGTTGATATATTGGATGATGGGTACCGCTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACAAATGCTGGTTGCCCTGTTAGAAAGCATGTGGAGCGAGCATCTCATGATCCGAAAGCAGTAATAACCACATATGAGGGGAAACACAACCATGATGTGCCAACTGCAAGGAATAGTAGCCATGACATGGCAGGACCAGCAGCTCCCATTGGACAGGCCAGAATTAGGCCAGAAGAAAGTGATACAATTAGCCTTGACCTTGGGATGGGCGTCAGCCCAGCCGCTGAAAATAGCTCAAATGGGCAAGGGAGAGCACTGCTTTCTGAATTTGGGGACAGTCAAACTCACACAAGCAATTCCAATTTCAATTTTATTCACACTACCCCACCTCCAGTATACTTTGGGGTTCTAAATAACAGCTCGAATCCATATGGTTCTAGAGAAAATCTGAGTGATGGTTCATCTTTAAACCACTCTGCTTATCCTTGCCCGCAGAACATGGGAAGAATACTAACGGGTCCATAA 1821 0.4695 MDAGDYHSGSELRRTSPAADAEFQSEDPNRSWSRPDSSAGATSSFTAAAASTGGARYKLMSPAKLPISRGPCVTVPPGFSPTSFLESPVLLSNMKVEPSPTTGSLSKLRQIVHGSVTSAASTTFPVSTVCFNTNTVDDRKSSFFEFKPHNRSNMVPAEFDNHVNEKSTQIDGQGNSHSFPSSPAVKSEAAVPSNELSLSSPVQMVSSGASAHVEVDLDEFNHKGNTAAGLQASKVEGKSSGLSVASERVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPNRRYSAGSIMSMQEERSDKASSLAGRDDKASSIYGRVSHPAEPSSTPEHSPVTTNGDSPEGLGFVSNRINDEIDDDDPFSKRRKMDLGNADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNSSHDMAGPAAPIGQARIRPEESDTISLDLGMGVSPAAENSSNGQGRALLSEFGDSQTHTSNSNFNFIHTTPPPVYFGVLNNSSNPYGSRENLSDGSSLNHSAYPCPQNMGRILTGP* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0711 606 MobiDBLite consensus disorder prediction 380 395 - -
Dod05g0711 606 MobiDBLite consensus disorder prediction 322 395 - -
Dod05g0711 606 MobiDBLite consensus disorder prediction 26 44 - -
Dod05g0711 606 MobiDBLite consensus disorder prediction 167 183 - -
Dod05g0711 606 Gene3D WRKY domain 239 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g0711 606 Gene3D WRKY domain 411 487 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g0711 606 Pfam WRKY DNA -binding domain 251 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0711 606 Pfam WRKY DNA -binding domain 427 483 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0711 606 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 42 586 IPR044810 GO:0003700
Dod05g0711 606 SUPERFAMILY WRKY DNA-binding domain 418 486 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g0711 606 MobiDBLite consensus disorder prediction 167 186 - -
Dod05g0711 606 ProSiteProfiles WRKY domain profile. 421 486 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0711 606 SUPERFAMILY WRKY DNA-binding domain 247 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g0711 606 MobiDBLite consensus disorder prediction 354 372 - -
Dod05g0711 606 SMART WRKY_cls 426 485 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0711 606 SMART WRKY_cls 250 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0711 606 ProSiteProfiles WRKY domain profile. 245 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g0711 606 MobiDBLite consensus disorder prediction 1 44 - -
Dod05g0711 606 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 42 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0711 Dod-Chr5 10887524 10894040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0711 60 606 WRKY Transcription Factor Family AT4G26640 56.989 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod05g0711 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0711 - - adu:107464084 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0711 05 10887524 10894040 Dod05g0711 05 10887524 10894040 ECH
Dod05g0711 05 10887524 10894040 Dod08g0212 08 2451107 2457890 PCT