Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0684 ATGGCTGAAACCGCAGTTAGCCTTGTGTTTGACAGGTTAGAGAAGCTGCTTCGTGCAGAAGTGAGAATCTTTGCAGGTGTTCACGACGAGGTCAAGCGCATCAAAGACCAACTTGGACTCATCAATTCTTACTTGGAAGACGCAGACAACCTAACAGAGGCAGCAGAAACTAACAACAGCAGCAGCACATCATCATCATCATCATCATCAAGCGGTGCGAAAAAGTGGGTGGTTCAAATGAGGGAGTTGGCGTTTCTCATGGAAGACGTGGTTGATCACTACTTGCTCAAAGTGGTGGAGCGTCGCCAGAGGCATGGGGTCTTTGGTGCTGTCACAAAAGGCGTGGAGAAGCTCAAAACGGTGACGCATCGACACGATATTTCCTGCAAGATTCGGGAGATTGAAGACACAATGGATAGTCTCAGCAAAACGAGAGAAGGGTTGGATTTCAAGAAATCTACGATGACAATAAACGCCAATGAAAATCAAAGGCCTTTCGATCGAAGGCTTGGGGCGCATTTTGCTGAGGAATCCCATCTGGTGGGTATCAAGCGCGACCAGCAAGCGTTGACGGAGTGGCTCTTAGGTGGAGAAAGCAAGCTCTCAGTGATGGTGGTCGTTGGCCCCGGAGGAATCGGTAAAACGACAATTGTGAAGAATGTGTACACCAAGCATAAGGAGATGGGATCTTTCCAATGTTATGCATGGATCACCGTGTCTCACCTCCAAGGTGAGTTCATGCTATTAGAGGCGATTATAGAAAACATTCATGCGGAGCGCCCCGATCCCAGTGCAATTGTTGCCTTTAAATCTAATGAAGAAGAATTACTCTTAAACCGAATACAAAAACAGTTAAAGGGTAAGAGGTATCTTATTGTGCTTGATGATGTTCGAGAATCACGTATTTGGGGTGTCCTCAAATACGCCATGGTAGATAACAATAAACACAGCAGGGTAATTATCACAACACGTGATGGAGGAGTTGCAGACTTTTGTAGAAGTGTCACTGATGCAAATGTTCATGTACACAAATTGAAACCTCTGTCTCTGCGTGACGCCTTGGAGCTTTTTCACAGAAAGACATTCAGGGAAGAAGGGTGCCCGGAAGAGTTGAATGCATTGTCTGAGAACTTTGTTAGGATATGCAATGGGGTGCCCCGTGCCATTGTGGCTATAGCTGGTCTCTTATCAATCAAGAGGAAAACTGAAACTGAATGGAGAAAGGTGCACAGTCAACTTGGCTCAGGCTCATTATTACAGAGTGACCATTTTCTTTTGATCCAACAAGTAATGTCAGAAAATTACCATGCTCTTCCTTCACACCTCAAGCGATGCCTTTTATACTTTGGTCTTTTTCCTGAGGGCTACTCAATTAGTTGCATGAGGCTCTCTCGTTTGTGGGTAGCTGAGGGCTTTGTGAAGGAAAAAGAGGGTGAAAACACAGAAATAATATTGGAGGAACAAGCAGAAGAGTACTTAATTGATCTTTTCCGCAGGGGTTTGGTTCAATTTTCAAGGGTGGATTTCGATGGCGGACCCAAGAGTTGCCATGTGGATCATCTCATGCACAAGTTCATACTTCAGAAGTGCAAGGAGCAGAATTTCTCCCAAGTCATGATGAATGATGAAATCACACGACCTACATCCAAGTTAGATTCAGTTGGAAGGCGCTTAACAATCCTTGCAAAGAGTAATGACAGTGTTGATTTGACAAGTGCTGCAGAAGTGAAACGGGTGCGATCTTGTTTTGTTTTTGATGAGGCCAAAAAGTGGCCATTGACAAAACCATTTTTCTCCAGTTTTGAACTTTTGGCTGGATTAGACTTGTCTGATGCTTGCCTTGATCTTCTTCCTGAAGAAATTGGGGAACTACTGAACCTGAGATACTTGAGCTTGAGGAACACCAACATCAGGTACCTTCCACAGTCCATCGGCAAGCTAGAGAACCTTCAGACTCTAGATCTAAAGCGAACCCAAGTGCATGAATTGCCAGAGGAAATTAAGAACCTCATCAAGTTGCGTCATCTCCTAGCATATTATATCAACAACCAGCATTTTGGTTTGGACCGTTTAGAAGGAGTGAAGTTGAAGGCGGGGCTTCATAATCTGACTTCTTTGCTGAAACTATCATTTTTGGATGCAACTAATTCTTCAAGCCTAATAGAGCAACTGGCAAAACTAAAGAAGCTAAGGAAACTGGGCATTATTAAGCTTAGAAAACAAGATGGTGAAGCATTGTGCAAGGCCATAGAAGGAATGACCCACCTATGTTCCCTAAGCATTGGAGCAATGAAAAGTACTGAAATTCTTATGTTGCAATCTTTAAGCAATCCCCCGCAGGACCTCCAACGCCTTTACCTAAACGGGCGTTTGGAAAGATTTCCAAATTGGGTGCCAAAACTTAAGAATCTTATCAGATTGTACTTGAGGTGGTCTAGTCTCGAGGAAGATCCATTGCCTTACCTTAAGAACTTGTCTGAATTGTTGCACCTCGAGCTTTATGAAGCTTATGAAGGTGATGAGCTGCATTTCAAGAATGCATGGTTGAGAGGCTTGAAGGTTTTGCACATAGAATCCATGCCAAAGTTGAGGACAATAAGAGTAGATGGAGGAGCACTTCCCTGTCTTGAAAAATTGAAGATAGGGAAGTGTCAAGAAATGGTGCAGGTTCCCAGGGATTTGCAGAACTTGACTAGTCTCAATGCTCTTCATCTTTACGATATGCCTGATCAATTTGTAAATAGAATAATGGGTCCACGACGAGAAGACTACATCTGGATTGTTAACAAAATACCTGAGGTTTTATATGCCAAGAATGACCATTTTGTCAATCTTCACAATTTTGATCACTGA 2853 0.4339 MAETAVSLVFDRLEKLLRAEVRIFAGVHDEVKRIKDQLGLINSYLEDADNLTEAAETNNSSSTSSSSSSSSGAKKWVVQMRELAFLMEDVVDHYLLKVVERRQRHGVFGAVTKGVEKLKTVTHRHDISCKIREIEDTMDSLSKTREGLDFKKSTMTINANENQRPFDRRLGAHFAEESHLVGIKRDQQALTEWLLGGESKLSVMVVVGPGGIGKTTIVKNVYTKHKEMGSFQCYAWITVSHLQGEFMLLEAIIENIHAERPDPSAIVAFKSNEEELLLNRIQKQLKGKRYLIVLDDVRESRIWGVLKYAMVDNNKHSRVIITTRDGGVADFCRSVTDANVHVHKLKPLSLRDALELFHRKTFREEGCPEELNALSENFVRICNGVPRAIVAIAGLLSIKRKTETEWRKVHSQLGSGSLLQSDHFLLIQQVMSENYHALPSHLKRCLLYFGLFPEGYSISCMRLSRLWVAEGFVKEKEGENTEIILEEQAEEYLIDLFRRGLVQFSRVDFDGGPKSCHVDHLMHKFILQKCKEQNFSQVMMNDEITRPTSKLDSVGRRLTILAKSNDSVDLTSAAEVKRVRSCFVFDEAKKWPLTKPFFSSFELLAGLDLSDACLDLLPEEIGELLNLRYLSLRNTNIRYLPQSIGKLENLQTLDLKRTQVHELPEEIKNLIKLRHLLAYYINNQHFGLDRLEGVKLKAGLHNLTSLLKLSFLDATNSSSLIEQLAKLKKLRKLGIIKLRKQDGEALCKAIEGMTHLCSLSIGAMKSTEILMLQSLSNPPQDLQRLYLNGRLERFPNWVPKLKNLIRLYLRWSSLEEDPLPYLKNLSELLHLELYEAYEGDELHFKNAWLRGLKVLHIESMPKLRTIRVDGGALPCLEKLKIGKCQEMVQVPRDLQNLTSLNALHLYDMPDQFVNRIMGPRREDYIWIVNKIPEVLYAKNDHFVNLHNFDH* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0684 950 Gene3D - 4 128 - -
Dod05g0684 950 Gene3D - 170 340 IPR027417 -
Dod05g0684 950 Gene3D - 348 434 IPR042197 -
Dod05g0684 950 PANTHER - 30 912 - -
Dod05g0684 950 CDD RX-CC_like 2 143 IPR038005 -
Dod05g0684 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 449 IPR027417 -
Dod05g0684 950 Pfam Rx N-terminal domain 5 104 IPR041118 -
Dod05g0684 950 Pfam NB-ARC domain 187 418 IPR002182 GO:0043531
Dod05g0684 950 PRINTS Disease resistance protein signature 382 396 - -
Dod05g0684 950 PRINTS Disease resistance protein signature 284 298 - -
Dod05g0684 950 PRINTS Disease resistance protein signature 645 661 - -
Dod05g0684 950 PRINTS Disease resistance protein signature 203 218 - -
Dod05g0684 950 SUPERFAMILY L domain-like 576 912 - -
Dod05g0684 950 Gene3D Ribonuclease Inhibitor 572 916 IPR032675 -
Dod05g0684 950 Gene3D - 435 530 IPR036388 -
Dod05g0684 950 PANTHER DISEASE RESISTANCE PROTEIN RP 30 912 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0684 Dod-Chr5 10251935 10258932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0684 175 417 WRKY Transcription Factor Family AT4G12020 26.295 9.71e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0684 K13457 - gmx:100782327 926.006