Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0679 ATGGGAACCTGCATTGAAAGTGTTGCACAAGGTGAAGAGGAGCATATCTTTTATAGCCAATACAAACCTGTTCCGGTTCCTGACAATGTGACATTGCCGGAATTTGTGCTCCAACAAGCTGAATTGTATGCTGATAAGGTTGCATTTGTGGATGCTGTGACTGAGAAAAAGATTACTTATAAAGAGGTGGTGAGAGACACACACAGGTTTTCAAAGGCCTTAAGATCTATTGGTCTGAGGAAGGGGCATGTTGTGATTGTAGTGCTTCCAAATGTAGCAGAATATGCCATCATTGCTCTGGGGATAATGGCTGCTGGTGGGGTGTTTTCAGGAGCAAACCCAGCATCACATGCATCAGAAATCAAGAAACAGGCAGAGTCTGCTGATGCTAAATTGATCGTCACAAATGATACAAACTACGAAAAGGTAAAAGGACTAGAGCTACCTGCAATAGTGCTATCAGATGAACTTGTTGGAGATGGTATGAATTGGAAAAAACTGCTTGAAGCAGCAGACCGTGCAGGTGATTGTTTGCTAAAGGAATCTATTCAGCAGAATGATCTTTGTGCCATGCCTTTCTCATCAGGCACCACAGGACTGTCAAAGGGTGTGATGCTTACCCACAGAAACCTAGTAGCTAATCTTTGCTCCACACTCTTCGGTGTGGAGCCAGAAATGATTGGTCAGGTCACCACACTAGGCTTGATTCCCTTCTTTCACATTTATGGCATCACTGGAATATGTTGTGCCACTCTTAAGAGCAAAGGGAAAGTTGTGGTGATGGGAAGGTTTGAACTGAAAACATTTCTCAATGCCTTGATCACACATGAGGTCACATTTGCACCAATTGTGCCCCCAATCATTCTCACCTTGGTCAAAAATCCCACAGTGAATGAGTTTGATCTCAGCAAGCTTAAACTCCAGGCCATTATGACTGCAGCAGCACCACTTGCACCAGAAGTACTAACTGCCTTTGAGCACAAGTTCCCTGGAGTTATTGTCCAAGAGGCATATGGACTAACTGAGCACAGCTGCATCTCACTTACTCATGCACAAAAAGGTTCACGAATTCTGCATAAAAATTCAGTGGGGTTCATCCTCCCAAATTTGGAAGTCAAGTTTATTGATCCTGATACTGGTCGATCCCTCCCAAGGAACACACCCGGGGAACTTTGTGTAAGAAGCCAATGTGTAATGCAAGGTTACTATAAACAGGTGGATGAGACTGCTCAGACCATTGACAAGAATGGTTGGCTTCACACGGGGGACATAGGATTCATAGATGATGAAGAAAATATATTTATTGTTGATCGTATCAAGGAGTTAATTAAATACAAAGGCTTCCAAGTTGCTCCTGCCGAGTTAGAGGCCATTTTGCTGTCTCATCCCTCAATTGAAGATGCAGCTGTTGTGCCATTACCAGATGAAGAGGCAGGGGAAATACCAGCTGCAAGTGTTGTTTTGAGCCCGGGTGCAACAGAGAGTGAAGAGGACATTATGAAATATGTTGCCTCCAATGCTGCACACTACAAGAAAGTGAGAGTGGTGCACTTTGTAGAAGCCATACCAAAATCGCCTTCTGGGAAAATAATGAGAAGGCTTGTCAAAGAGAGGATGGTGGAAAAGATGAAGACAAGCTCCACAACGAAATCAAACACTTCTTAA 1665 0.436 MGTCIESVAQGEEEHIFYSQYKPVPVPDNVTLPEFVLQQAELYADKVAFVDAVTEKKITYKEVVRDTHRFSKALRSIGLRKGHVVIVVLPNVAEYAIIALGIMAAGGVFSGANPASHASEIKKQAESADAKLIVTNDTNYEKVKGLELPAIVLSDELVGDGMNWKKLLEAADRAGDCLLKESIQQNDLCAMPFSSGTTGLSKGVMLTHRNLVANLCSTLFGVEPEMIGQVTTLGLIPFFHIYGITGICCATLKSKGKVVVMGRFELKTFLNALITHEVTFAPIVPPIILTLVKNPTVNEFDLSKLKLQAIMTAAAPLAPEVLTAFEHKFPGVIVQEAYGLTEHSCISLTHAQKGSRILHKNSVGFILPNLEVKFIDPDTGRSLPRNTPGELCVRSQCVMQGYYKQVDETAQTIDKNGWLHTGDIGFIDDEENIFIVDRIKELIKYKGFQVAPAELEAILLSHPSIEDAAVVPLPDEEAGEIPAASVVLSPGATESEEDIMKYVASNAAHYKKVRVVHFVEAIPKSPSGKIMRRLVKERMVEKMKTSSTTKSNTS* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0679 554 Pfam AMP-binding enzyme 38 445 IPR000873 -
Dod05g0679 554 SUPERFAMILY Acetyl-CoA synthetase-like 21 542 - -
Dod05g0679 554 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 542 - -
Dod05g0679 554 CDD 4CL 26 533 - -
Dod05g0679 554 Pfam AMP-binding enzyme C-terminal domain 454 529 IPR025110 -
Dod05g0679 554 Gene3D - 14 440 IPR042099 -
Dod05g0679 554 Gene3D - 441 544 IPR045851 -
Dod05g0679 554 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 9 542 - -
Dod05g0679 554 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0679 Dod-Chr5 10154903 10157964 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0679 5 540 Monolignol Biosynthesis Gene Families AT1G62940 72.862 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0679 K01904 - gmx:100811418 937.947