Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0649 ATGCCTGGAAGCTTAAGGAATCTGTCATCACTTTCTCCCAAAATCTTCTCCTTCACCTTGCTTCTCTCATTAAACTCCCTTATCTTCTTCTTACCATGTTATTACTCCCTTAATGAACAAGGCCAAGCTCTTGTAGCATGGAAGAACAGCTTGAACAGCACCTCAGATGCATTAGCATCATGGAACACTTCAGCCTCAACCCCATGCAACTTTTTTGGGGTGCACTGCAACTCACAAGGGGATGTGATCCAAATAAGCCTGAAATCAGTGGACTTGCAAGGCTCATTTCCTTCAAATTTCCAACCTCTCAAAAAGTCATTGAAGATTCTTATCCTCTCATCAACCAACATCACAGGAAGGATTCCAAAGGAGATTGGAGACTACCAAGAGCTCGTATTTGTTGATGTCAGTGGCAATTCTCTCTTTGGTGAGATCCCAGAAGAGATTTGCAGGCTAAGCAGACTTGAGAGTTTGTCTCTACATACAAACTCGCTTGAAGGAAACATTCCATCCAACATTGGAAATTTATCAAGCCTTGTCAACTTGACACTCTATGACAATCACTTGAGTGGTGAGATTCCAAAGAGTATTGGCTCCTTGAGCAAGCTCCAAGTGTTAAGAGCTGGTGGCAATAGGAATCTCAAGGGCCTTGCAGAAACCAGCATTTCTGGGAGCATTCCTTCTTCAATTGGAATGCTGAAAAGGATTCAGACCATAGCAATTTACACAACATTATTGTCAGGGCCTATTCCAGATGAGATTGGCAACTGCAGTGAGTTGCAGAACCTGTACTTGTACCAGAACTCTATCTCAGGTTCAATCCCAAGCCAAATTGGAGAACTCAGCAAGCTTGAGAGTCTGCTTTTGTGGCAAAACAATATTGTAGGTACAATCCCAGAAGAGATTGGAAGCTGCAAAGAGATTGAAGTCATAGATTTATCAGAAAATCTTCTCACGGGTAGCATACCAGGGAGTTTTGGTCAGCTTTCAAATCTCCAAGAGCTTCAGCTTAGTGTCAATCAGCTCTCAGGTACAATACCTCCTGAAATCTCAAACTGCACCTCTCTGACTCAACTTGAACTCGACAACAATGCTCTCTCCGGTGAGATTCCAGAATTCATCGGTAACTTAAGAGGCTTGACTCTATTCTTTGCTTGGCAGAACAAGCTGACAGGAAAAATCCCAGATAGTCTTTCACAGTGCCAAGACCTTGAGGCACTTGATCTGTCCTACAACAATTTGATTGGTCCAATTCCCAAACAACTATTCGGTTTGAGGAATCTCACAAAACTTTTGCTTCTTTCCAATGATTTATCAGGCTTTATACCACCTGATATAGGTAACTGCTCTAGTCTCTACCGGCTGCGGTTGAATCACAATAGACTGGCAGGTAACATTCCACATGAGATCGGCAATTTGGAGAATTTGAATTTTTTGGATATGAGTAGCAATCATCTTGTAGGGGAGATTCCTCCTACACTATCTGGATGCCAGAATCTTGAGTTTCTTGATCTTCATTCAAATATTCTCACAGGTTCTGTACCAGATTCTCTTCCCAAAAGCCTGCAGTTAATTGACTTCTCAGACAACAGGCTAGCAGGTCCATTGAGTCATACCATTGGTACATTAGTTGACTTAACCAAACTCTACCTTGGAAAGAATCAGATCAATGGAAGAATCCCTTCAGAGATTCTATCTTGCACTAAGCTGCAGCTTCTTGATTTGGGAAGCAACAGTTTCTCAGGAGAAATACCAAAGGAATTAGGCCTAATTCCTTCACTAGAAATCTCTCTCAATCTTAGCTGTAACCAGCTTTCTGGTGAAATTCCATCCCAATTCTCTAGCCTTAGCAAATTAGGAGTGCTTGATCTCTCACACAACATGCTCTCAGGGAATTTAGGTGCTCTCTCGGACCTTGAGAATCTTGTTTCCTTAAATGTTTCATTCAACGGCTTCTCTGGTGAGTTGCCTAACACCCCTTTCTTCCATAAGCTCCCTCTCAGTGATCTCACTGAGAATGATGGTCTCTACATTGCTGGGGGTGTTTTGACTCCTGCTGACACAATGGAATCAAAAGGTCACACCAGATCAGTCATGAAGTTTGTCATGTCAATTCTCTTAAGCATCAGTGCAGTGCTAGTGCTGCTCACAGTCTGTGTCTTGGTTCGTGCTCATATCGCAAACAAATCGCTCATGGAGAATGATAGTTGGGAGATGACATTGTATCAGAAGCTTGAATTCTCCATTGATGACATTGTCTTGAATTTGACTTCAGCCAATGTGATTGGCACAGGAAGTTCTGGAGTTGTGTATAAGGTAACAATTCCAGGTGGTGAGACAGTAGCAGTTAAAAAGATGTGGTCATCAGAAGAGTCTGGAGCATTCAATTCTGAAATCCAAACTCTTGGTTCAATCAGGCACAAGAATATCATCAGGCTTCTTGGTTGGGGATCCAATAAGAACCTGAAGCTTCTGTTTTATGACTACCTCCCCAATGGAAGCCTTAGCTCATTGCTTCATGGTTCAGGAAAGGGAAAAACAGAATGGGAGACAAGATATGATGTCATATTAGGTGTGGCTCATGCACTTGCATATTTGCACCATGATTGTGTGCCTGCTATAATGCATGGAGATGTCAAAGCCATGAATGTTTTACTAGGTCCTGGCTATCAACCTTACCTTGCTGACTTTGGCCTGGCAAGAATTGCAAATGAAAATGGCAACGGCACAAATTCCATACCAGTTCAAAGACACTACCTTGCAGGCTCATATGGATACATGGCTCCTGAGCATGCATCTATGCAGCCTATCACTGAGAAGAGTGATGTATACAGTTTTGGTATGGTTCTGCTTGAGGTTCTAACAGGAAGGCACCCATTAGACCCAACTCTACCAGGTGGTGCATACTTGGTTCAATGGGCTAGGAACCACTTGGCTGGCAAAAGGGACCCTTATGACATTCTTGACACAAAACTTAGAGGCAGAGCTGACCCTACAATGCATGAGATGCTACAAACTCTAGCAGTGTCATTCCTTTGTGTCAGCACAAGAGCTGAAGACCGCCCTACAATGAAGGATGTTGTTGCAATGCTAAAGGAAATTAGGCCTATTGAGGCCTCAAGGGGAGACCCTGAAGTATTGAAAGGAGGCTTAACATCACATAGTTCACCACCTCCACCACCGACCACAACCTCCTAA 3198 0.4303 MPGSLRNLSSLSPKIFSFTLLLSLNSLIFFLPCYYSLNEQGQALVAWKNSLNSTSDALASWNTSASTPCNFFGVHCNSQGDVIQISLKSVDLQGSFPSNFQPLKKSLKILILSSTNITGRIPKEIGDYQELVFVDVSGNSLFGEIPEEICRLSRLESLSLHTNSLEGNIPSNIGNLSSLVNLTLYDNHLSGEIPKSIGSLSKLQVLRAGGNRNLKGLAETSISGSIPSSIGMLKRIQTIAIYTTLLSGPIPDEIGNCSELQNLYLYQNSISGSIPSQIGELSKLESLLLWQNNIVGTIPEEIGSCKEIEVIDLSENLLTGSIPGSFGQLSNLQELQLSVNQLSGTIPPEISNCTSLTQLELDNNALSGEIPEFIGNLRGLTLFFAWQNKLTGKIPDSLSQCQDLEALDLSYNNLIGPIPKQLFGLRNLTKLLLLSNDLSGFIPPDIGNCSSLYRLRLNHNRLAGNIPHEIGNLENLNFLDMSSNHLVGEIPPTLSGCQNLEFLDLHSNILTGSVPDSLPKSLQLIDFSDNRLAGPLSHTIGTLVDLTKLYLGKNQINGRIPSEILSCTKLQLLDLGSNSFSGEIPKELGLIPSLEISLNLSCNQLSGEIPSQFSSLSKLGVLDLSHNMLSGNLGALSDLENLVSLNVSFNGFSGELPNTPFFHKLPLSDLTENDGLYIAGGVLTPADTMESKGHTRSVMKFVMSILLSISAVLVLLTVCVLVRAHIANKSLMENDSWEMTLYQKLEFSIDDIVLNLTSANVIGTGSSGVVYKVTIPGGETVAVKKMWSSEESGAFNSEIQTLGSIRHKNIIRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGSGKGKTEWETRYDVILGVAHALAYLHHDCVPAIMHGDVKAMNVLLGPGYQPYLADFGLARIANENGNGTNSIPVQRHYLAGSYGYMAPEHASMQPITEKSDVYSFGMVLLEVLTGRHPLDPTLPGGAYLVQWARNHLAGKRDPYDILDTKLRGRADPTMHEMLQTLAVSFLCVSTRAEDRPTMKDVVAMLKEIRPIEASRGDPEVLKGGLTSHSSPPPPPTTTS* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0649 1065 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1046 - -
Dod05g0649 1065 Gene3D Ribonuclease Inhibitor 520 596 IPR032675 -
Dod05g0649 1065 SMART LRR_sd22_2 152 178 - -
Dod05g0649 1065 SMART LRR_sd22_2 616 641 - -
Dod05g0649 1065 SMART LRR_sd22_2 543 575 - -
Dod05g0649 1065 SMART LRR_sd22_2 257 283 - -
Dod05g0649 1065 SMART serkin_6 756 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0649 1065 Pfam Leucine rich repeat 597 651 IPR001611 GO:0005515
Dod05g0649 1065 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Dod05g0649 1065 SUPERFAMILY RNI-like 280 633 - -
Dod05g0649 1065 ProSiteProfiles Protein kinase domain profile. 756 1034 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0649 1065 ProSiteProfiles Leucine-rich repeat profile. 618 640 IPR001611 GO:0005515
Dod05g0649 1065 SUPERFAMILY Protein kinase-like (PK-like) 752 1031 IPR011009 -
Dod05g0649 1065 Gene3D Ribonuclease Inhibitor 322 418 IPR032675 -
Dod05g0649 1065 Gene3D Ribonuclease Inhibitor 37 215 IPR032675 -
Dod05g0649 1065 Gene3D Ribonuclease Inhibitor 597 680 IPR032675 -
Dod05g0649 1065 Gene3D Ribonuclease Inhibitor 419 519 IPR032675 -
Dod05g0649 1065 Gene3D Ribonuclease Inhibitor 216 321 IPR032675 -
Dod05g0649 1065 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 1046 - -
Dod05g0649 1065 Gene3D Phosphorylase Kinase; domain 1 721 829 - -
Dod05g0649 1065 ProSitePatterns Serine/Threonine protein kinases active-site signature. 874 886 IPR008271 GO:0004672|GO:0006468
Dod05g0649 1065 ProSitePatterns Protein kinases ATP-binding region signature. 762 785 IPR017441 GO:0005524
Dod05g0649 1065 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Dod05g0649 1065 SMART LRR_typ_2 616 638 IPR003591 -
Dod05g0649 1065 SMART LRR_typ_2 425 449 IPR003591 -
Dod05g0649 1065 SMART LRR_typ_2 152 176 IPR003591 -
Dod05g0649 1065 SMART LRR_typ_2 281 305 IPR003591 -
Dod05g0649 1065 SMART LRR_typ_2 543 567 IPR003591 -
Dod05g0649 1065 SMART LRR_typ_2 639 663 IPR003591 -
Dod05g0649 1065 SMART LRR_typ_2 329 353 IPR003591 -
Dod05g0649 1065 SMART LRR_typ_2 473 497 IPR003591 -
Dod05g0649 1065 Pfam Protein kinase domain 759 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0649 1065 Gene3D Transferase(Phosphotransferase) domain 1 830 1044 - -
Dod05g0649 1065 SUPERFAMILY L domain-like 66 300 - -
Dod05g0649 1065 MobiDBLite consensus disorder prediction 1039 1065 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0649 Dod-Chr5 9721253 9725071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0649 31 1061 Receptor kinase-like Gene Family AT5G56040 66.127 0.0 1371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod05g0649 Pkinase 8.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0649 - - gmx:100802880 1728.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0649 05 9721253 9725071 Dod05g0649 05 9721253 9725071 ECH