LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod05g0644	ATGGCGGAGATTGCAGTGAACCTAGTGATTGACAAGTTGATACCATTATTGAGGTACGAAGCGACGCTCTTGAGATCGGTGCACTCCGAGGTAGCATTCATCAAAAACCAATTAAGCCTCATAAAAGCGTACCGGAGGGATGCAGATGTGAAGGCAGAGAAAGAGGAAAAGAGTGACGTGGTGAAAGAGTGGGTGAAGCAAGTGAGGGAAGTTGCACACCGCATAGAAGATGTCATTGACGAGTACTTGCTCCAAGTCGCCCAGCGACGCCAAAGACGTGGCGTCGCGGGCGTCTTGAAGAAGATAGCGCGGCTCTTGAGAAGCATAGAGCCGCGGCATGGGATCGCGTCGGAGATTCGTGAGATCAACAGAGAGATCACCGCGCTTGACAGGAGGATGGAGGCTCTGGGGTTCATCACATCGGATGCAGAATCAAGGAGTCATGGTGGTGGGAACAAGGGTGATTCTTCTTCAAGTGCCACAGGGCATGACCTTCGAAGGGGTACACCTTTTCTCGAGGATGCAAAGCTTGTGGGAACCAATGGCACGAGGAAGAAACTCAAGAACTTGCTGCTTGATGAATATTGCAGACGCACGGTCATTGGAGTGGTCGGCACAGGTGGACTAGGTAAAACAACTATTACAAAGAAACTATATGAGAAGGAGAAAGACAACAGGTTCGATTGCAGTGCTTGGATCACAGTGTCAAGCACGTTCAAGGAGAAAAGTATATTCAAGTCAATGTTGGAGAGACTGCATGATCAAGAAAACTATGATGATGACTTCCAAGCCATGTCGATCATGAGATTGAGCAAAGAAACTCTGATAAGAAAAGTGAGACAATTTTTAGAAGACAAGAGCTACTTGATTGTCTTTGATGATGTTTGGGCACAAGACTTCTGGGGCATTGTTGAGAACGTATTGCCAGAGAACAACAAAAGAAGCAGGATTATCATCACAATGAGGAATATGGGTGTGGTTAAGTTTTGTAAGCCTTTCGCTCAAGTTCATATTCATGAATTGCAACGCCTAAGTCCAAGTGATGCTATGCAGCTTTTCATTCACAAGGCGTTTCAGTTCAGGCTAGAAGAAGGGTGTCACAATGAGGAATTGATGAAATTGTCAAGAGACATGGTGGAAAGATGCAATGGGGTGCCACTATCAATTGTTGCCATTGCTAGCCTCCTTTCAACAAAGGACAACAACTTTATTGAATGGAAAAAAAAAGGGTTGGTGAATGTCAAGGAGAACCAACATCGCACCCCAGAGGAAGTTGTAGAGGAAAACTTAGATGAATTGATTCGTAGGAATCTAGTTATAGTTTCTTCTACGTATTATGATGGCAGGGCCAGAACTTGTAGTGTAGATGACCTATTGCATGACTTTATTAAAGAAAAGTGTGCTGAGATGGACTTTTGCCAAGTGATAAAAGGTGATAACTTCAACTTCAATTCAACCACTAGGCGCTTATCAATCCAAGGTAGTAGAGAATATGCTGACTTTGGTAGAGGTGATGGGGATCAGACCCGAGTGAGGTTCTGCTTTGTGTTCAACTTTGAGGAAATGCCAAGGGATCTATTGAACTCCTTCCTCTCAAGTTTCAAGCTCTTGGTTGGACTGGACTTTGAAGATGCACCTCTTGATGATTTCTCTCAAGCACTTGCTAACTTGCTGCACTTGAAGTACTTGAGCTTGAGGAACACTACTGTCAAGACCCTTCCAAGGTTCATTGGCAAGCTTCACAACCTGGAAACTCTGGACTTGAAATTCACTCAAGTGCGTGAATTGCCTGTTGAGATTAACAAGCTCATCAAGTTGCGGCACCTTCTGGCTTATTCCCTCAATGTGGAATTCAAGTTCAGCATGGCATCTCTACAAGGTGTGCTAATAAAGGAAGGGATTAGAAGGCTGAAGGCATTGCAAAAGCTGTTGAGGGTTGATATGACTAATGGGGACAACATTATCAAGGAATTGAAAAACTTGAAGCAATTGAGGAGATTTGGTGTTAACAAGCTAAGAAGACACAATGGGAAGCAATTGTGCAGTGCAATAGAGGGCATGACACGACTGTAA	2073	0.4428	MAEIAVNLVIDKLIPLLRYEATLLRSVHSEVAFIKNQLSLIKAYRRDADVKAEKEEKSDVVKEWVKQVREVAHRIEDVIDEYLLQVAQRRQRRGVAGVLKKIARLLRSIEPRHGIASEIREINREITALDRRMEALGFITSDAESRSHGGGNKGDSSSSATGHDLRRGTPFLEDAKLVGTNGTRKKLKNLLLDEYCRRTVIGVVGTGGLGKTTITKKLYEKEKDNRFDCSAWITVSSTFKEKSIFKSMLERLHDQENYDDDFQAMSIMRLSKETLIRKVRQFLEDKSYLIVFDDVWAQDFWGIVENVLPENNKRSRIIITMRNMGVVKFCKPFAQVHIHELQRLSPSDAMQLFIHKAFQFRLEEGCHNEELMKLSRDMVERCNGVPLSIVAIASLLSTKDNNFIEWKKKGLVNVKENQHRTPEEVVEENLDELIRRNLVIVSSTYYDGRARTCSVDDLLHDFIKEKCAEMDFCQVIKGDNFNFNSTTRRLSIQGSREYADFGRGDGDQTRVRFCFVFNFEEMPRDLLNSFLSSFKLLVGLDFEDAPLDDFSQALANLLHLKYLSLRNTTVKTLPRFIGKLHNLETLDLKFTQVRELPVEINKLIKLRHLLAYSLNVEFKFSMASLQGVLIKEGIRRLKALQKLLRVDMTNGDNIIKELKNLKQLRRFGVNKLRRHNGKQLCSAIEGMTRL*	691

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod05g0644	690	Pfam	NB-ARC domain	186	408	IPR002182	GO:0043531
	Dod05g0644	690	PANTHER	-	25	410	-	-
	Dod05g0644	690	MobiDBLite	consensus disorder prediction	145	164	-	-
	Dod05g0644	690	PANTHER	DISEASE RESISTANCE PROTEIN RP	405	688	IPR044974	GO:0006952
	Dod05g0644	690	Gene3D	-	169	336	IPR027417	-
	Dod05g0644	690	CDD	RX-CC_like	2	129	IPR038005	-
	Dod05g0644	690	SUPERFAMILY	L domain-like	471	688	-	-
	Dod05g0644	690	Gene3D	-	4	116	-	-
	Dod05g0644	690	Gene3D	-	343	433	IPR042197	-
	Dod05g0644	690	PANTHER	DISEASE RESISTANCE PROTEIN RP	25	410	IPR044974	GO:0006952
	Dod05g0644	690	PANTHER	-	405	688	-	-
	Dod05g0644	690	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	163	435	IPR027417	-
	Dod05g0644	690	Gene3D	Ribonuclease Inhibitor	509	690	IPR032675	-
	Dod05g0644	690	PRINTS	Disease resistance protein signature	382	396	-	-
	Dod05g0644	690	PRINTS	Disease resistance protein signature	200	215	-	-
	Dod05g0644	690	PRINTS	Disease resistance protein signature	282	296	-	-
	Dod05g0644	690	PRINTS	Disease resistance protein signature	578	594	-	-
	Dod05g0644	690	MobiDBLite	consensus disorder prediction	141	167	-	-
	Dod05g0644	690	Pfam	Rx N-terminal domain	5	91	IPR041118	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod05g0644	Dod-Chr5	9637607	9646824	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod05g0644	200	389	WRKY Transcription Factor Family	AT5G45050	27.692	1.64e-07	53.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod05g0644	K13457		-	csin:114293737	464.536