Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0636 ATGAGCGATTCTGCGTACAGGGTTGAAACCACTTCACGCCTCGCTCAATGGAGAATCGAGAACTTGGCATCTTGCACTTACCGCAAATCCGATCCTTTCAAGATCGGCAAGTGGAACTGGCATTTGTCGGTGGAGAAGAACAGGGTATTGTTTGTTAAGTTGTACCCAGAAATATCCAATCTAACTAGAGACAACCCACCAATTGCGTCTTTCATCATTAGGGTGGTTAGTTCTGTTGGAGATCGCAAGTCCCTCACACATCCAGAAATAAGGGATAAACTGATCAAGAGCAACGAGGACTTCGTTTGGGCAATTGAAGTTCCACTAACTGGGAAATTCATCATTGACGTTGAGTTCCTTGATTTGAAGACTTCATCCCCAAACGGTGGAGAACCTTGCTCTATCTGGGCTGAGGGATTCACTCAGAAAAGATTGAATGCAACAGCACTTGAATCTATTGGTAGAATGCTAACAGAAGGGATCCACACGGACATCACCATTAATGCTTCTGATGGAAGCATAGGAGCTCATCGAGCGGTTCTTGCTGCCCGGTCGCCTGTCTTTCGCAGCATGTTCTCGCATAATCTTCAGGAGAAAGAGCTGTCCACCATAAACATCTCAGACATGTCAATTGAAGCTTGTCAGGCATTTCTCAATTATCTCTATGGGATCATTAAAAATGAAGAATTTCTGACACACAGGCTGGCCCTTCTGCATGCAGCTGACAAGTATGACATATCTGACTTGAGAGAGGCTTGCCATGAGAGTCTTCTGGAAGATATTGACACAAAAAATGTACTTGAGAGGCTCCAAAATGCATCACTATATCAGTTGATGAAACTGAAGATGAGCTGTATCCGATATCTCGTGAAATTTGGTAAAATATTTGACATTCGGGATGATTTCAATACCTTCCTGCAAAATGCAGACAGGGATCTGATTGCTGAAGTCTTCCATGAAGTTCTTGATGCATGGAAAGGATTTTGA 987 0.4336 MSDSAYRVETTSRLAQWRIENLASCTYRKSDPFKIGKWNWHLSVEKNRVLFVKLYPEISNLTRDNPPIASFIIRVVSSVGDRKSLTHPEIRDKLIKSNEDFVWAIEVPLTGKFIIDVEFLDLKTSSPNGGEPCSIWAEGFTQKRLNATALESIGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHNLQEKELSTINISDMSIEACQAFLNYLYGIIKNEEFLTHRLALLHAADKYDISDLREACHESLLEDIDTKNVLERLQNASLYQLMKLKMSCIRYLVKFGKIFDIRDDFNTFLQNADRDLIAEVFHEVLDAWKGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0636 328 Pfam BTB/POZ domain 157 259 IPR000210 GO:0005515
Dod05g0636 328 PANTHER OS08G0495500 PROTEIN-RELATED 1 328 IPR044714 -
Dod05g0636 328 Gene3D Potassium Channel Kv1.1; Chain A 141 291 IPR011333 -
Dod05g0636 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Dod05g0636 328 PANTHER OS08G0495500 PROTEIN 1 328 - -
Dod05g0636 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Dod05g0636 328 SUPERFAMILY POZ domain 146 259 IPR011333 -
Dod05g0636 328 SMART BTB_4 163 261 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0636 Dod-Chr5 9474527 9477390 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Dod05g0636 BTB 3.9e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0636 K10523 - gmx:100790186 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0636 05 9474527 9477390 Dod05g0636 05 9474527 9477390 ECH
Dod05g0636 05 9474527 9477390 Dod08g1078 08 13709166 13713697 PCT