Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0635 ATGGCGAAGAAGTACGACCTAACCCCGGTGATGGCGCCGAATCTGGACAGGCACCTGGTGTTCCCTCTGCTGGAGTTCCTGCAGGAGCGTCAGCTCTACAACGACGACGACATCCTCAAGGCCAAGATCGACCTCCTCAACAACACCAACATGGTCGACTACGCCATGGACATCCACAAGACCCTCTACCACACCGAAGATGTCCCTCAAGATATGGTGGAGAGGAGGGCTGAAGTGGTGGCAAGGCTTAAGTCCCTGGAGGAGGCGGCTGCGCCGCTTGTGGCGTTCCTGCAGAATGCAGCCGCCGTGCAGGAGTTGAGGGCTGACAAGCAGTATAATCTTCAGATGCTCAATGACAGATACCAGATTGGTCCTGCACAAATAGAGGCATTATATCAATATGCCAAATTTCAATTTGAGTGTGGAAACTACTCTGGTGCTGCTGATTATCTTTATCAGTACAGGGCTTTATGCACGAACAGTGAAAGAAGTCTGAGTGCATTGTGGGGAAAGCTGGCAGCTGAAATTTTGATGCAAAACTGGGACATTGCACTTGAAGAGCTGAATCGCTTGAAGGAAATCATTGACTCGAAGAGTTTTGCATCACCCATGAATCAGGTGCAAAGTAGAATATGGTTGATGCATTGGAGTCTGTTCATCTTTTTCAACAATGACAATGGAAGAACACAGATAATTGATCTGTTTAATCAGGACAAGTATCTAAATGCAATCCAAACTAGTGCTCCACACCTCTTACGATACCTGGCCACAGCCTTCATTGTCAACAAGCGAAGGAGGCCTCAGTTCAAAGATTTCATAAAAGTTATTCAACAGGAACAAAATTCATATAAAGACCCCATCACTGAGTTTTTGGCTTGTGTCTATGTCAACTATGACTTTGATGGGGCACAAAAGAAGATGAGGGAGTGTGAAGAAGTGATTCTCAATGATCCCTTCCTTGGTAAACGAGTTGAAGAAAGCAACTTTTCTGCTGTTCCATTAAGGGATGAGTTCCTTGAAAATGCTAGGTTATTCATCTTTGAGACATACTGCAGAATACATCAACGCATTGACATGGGAGTGCTTGCTGAGAAATTAAATTTGAATTATGAGGAGGCTGAGAGGTGGATTGTGAATCTCATCCGTGGCTCAAAGCTTGATGCCAAGATTGACTCTCAAACAGGAACGGTTATCATGGAGCCCAATCATCCTAATGTGTATGAGCAGCTGATTGACCATACCAAGGCCCTTAATGGGCGTACTTACAAGTTAGTTAGTCAACTGCTGGAACATGCACAAGCGCAGGCAGCTCGATAA 1317 0.4548 MAKKYDLTPVMAPNLDRHLVFPLLEFLQERQLYNDDDILKAKIDLLNNTNMVDYAMDIHKTLYHTEDVPQDMVERRAEVVARLKSLEEAAAPLVAFLQNAAAVQELRADKQYNLQMLNDRYQIGPAQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERSLSALWGKLAAEILMQNWDIALEELNRLKEIIDSKSFASPMNQVQSRIWLMHWSLFIFFNNDNGRTQIIDLFNQDKYLNAIQTSAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYDFDGAQKKMRECEEVILNDPFLGKRVEESNFSAVPLRDEFLENARLFIFETYCRIHQRIDMGVLAEKLNLNYEEAERWIVNLIRGSKLDAKIDSQTGTVIMEPNHPNVYEQLIDHTKALNGRTYKLVSQLLEHAQAQAAR* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0635 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 436 IPR016650 GO:0003743|GO:0005737|GO:0005852
Dod05g0635 438 ProSiteProfiles PCI domain profile. 220 404 IPR000717 -
Dod05g0635 438 Hamap Eukaryotic translation initiation factor 3 subunit E [EIF3E]. 3 430 IPR016650 GO:0003743|GO:0005737|GO:0005852
Dod05g0635 438 Pfam eIF3 subunit 6 N terminal domain 6 138 IPR019010 -
Dod05g0635 438 Pfam PCI domain 286 400 IPR000717 -
Dod05g0635 438 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 333 417 - -
Dod05g0635 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 1 436 - -
Dod05g0635 438 Gene3D - 238 434 - -
Dod05g0635 438 SMART PINT_4 333 417 IPR000717 -
Dod05g0635 438 PIRSF Transl_init_eIF3e 1 438 IPR016650 GO:0003743|GO:0005737|GO:0005852
Dod05g0635 438 SUPERFAMILY "Winged helix" DNA-binding domain 333 404 IPR036390 -
Dod05g0635 438 SMART eIF3_N_2 6 138 IPR019010 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0635 3 438 Eukaryotic Initiation Factors Gene Family AT3G57290 86.697 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0635 K03250 - gmx:100797748 836.254