Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0630 ATGAAGATCACTGTAATGACTGCTGATGAACAAATTCTCACCTTGGATGTCGATCCCCACGAATCTGTGGAAAACGTCAAAGCATTACTGGAGGTTGAGACAAGTGTGCCTCTACAGCAGCAACAGATTCTGTTTAATGGGAAGGAAGTAAGGAATTCCGAGAAGTTGAGCGCACTTGGCGTGAAAGAAGATGATTTGTTGATGATGGTCACTGGTGGTTCTGCTTCTAGTGGATCTACCAATGAAGTGAGCTTAAATGCTGATGGATCTGCTGTAGACCCTGGTGCTTTCCAGCAGCACATTAGACGCGATTCTAATTTGATGGGTCAGCTCTTTCAGACTGATCCGGAGTTGGCACAAGCTATTCTGGGGAATGATCTTGATAGATTGCAGGAAATTTTGCGATTGCGTCATCGGCAAAGAGATGAATTACAGCGTCAGAAAGACGAAGAGCTTGCTCTTCTTTATGCGGATCCTTTTGATGTTGAAGCACAAAAAAAGATTGAAGCTGCCATCCGCCAGAAAGGAATTGATGAAAATTGGGCCGCTGCACTAGAACACAATCCTGAAGCTTTTGCTAGAGTGGTCATGCTGTATGTTGACATGGAGGTTAATGGTGTTCCACTGAAGGCATTTGTTGATAGCGGAGCCCAGTCTACGATTATATCTAAAAGCTGTGCTGAGCGTTGTGGATTGTTGAGACTCTTAGATCAGCGTTACAAAGGTATTGCTCATGGAGTTGGCCAATCAGAAATATTAGGTCGAATACATGTAGCTCCAATCAAGATTGGGAGTATATTTTACCCGTGCTCATTCTTAGTGCTGGATTCTCCCAATATGGAGTTTCTCTTTGGGCTGGATATGCTTCGAAAGCACCAGTGCATAATTGATTTAAGAGAGAATGTTCTGCGAGTTGGTGGAGGAGAAGTTTCTGTGCCATTTTTGCCAGAGAAAGACATACCAACCCGGTTTCTAGAGGAGGAAAAGTTTATCAAGGAAGCTTTAAGCTCAGGCAACCCAGTTACATCAGGAGGCAATAATCCATCACAAGGAGGCCAGTCTTCGGGGGGAGCTTCTGGTGGTAGGTCTAAGGACTCTGATTTTGAAGCCAAAGTTGCAAAGCTTGTTGAGTTGGGATTTGGAAGAGATGCAGTGATACAGGCTCTTCAACTATTCAATGGCAATGAGGAACAGGCAGCTGGGTTTCTTTTTGGGGGCTGA 1221 0.4447 MKITVMTADEQILTLDVDPHESVENVKALLEVETSVPLQQQQILFNGKEVRNSEKLSALGVKEDDLLMMVTGGSASSGSTNEVSLNADGSAVDPGAFQQHIRRDSNLMGQLFQTDPELAQAILGNDLDRLQEILRLRHRQRDELQRQKDEELALLYADPFDVEAQKKIEAAIRQKGIDENWAAALEHNPEAFARVVMLYVDMEVNGVPLKAFVDSGAQSTIISKSCAERCGLLRLLDQRYKGIAHGVGQSEILGRIHVAPIKIGSIFYPCSFLVLDSPNMEFLFGLDMLRKHQCIIDLRENVLRVGGGEVSVPFLPEKDIPTRFLEEEKFIKEALSSGNPVTSGGNNPSQGGQSSGGASGGRSKDSDFEAKVAKLVELGFGRDAVIQALQLFNGNEEQAAGFLFGG* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0630 406 MobiDBLite consensus disorder prediction 336 361 - -
Dod05g0630 406 PANTHER ASPARTYL PROTEASE DDI-RELATED 1 404 - -
Dod05g0630 406 Gene3D - 369 404 - -
Dod05g0630 406 SUPERFAMILY Acid proteases 183 298 IPR021109 -
Dod05g0630 406 Coils Coil 127 150 - -
Dod05g0630 406 Pfam Ubiquitin family 3 70 IPR000626 GO:0005515
Dod05g0630 406 SUPERFAMILY UBA-like 352 406 IPR009060 GO:0005515
Dod05g0630 406 Gene3D Acid Proteases 176 322 IPR021109 -
Dod05g0630 406 SMART uba_6 368 405 IPR015940 -
Dod05g0630 406 SMART ubq_7 1 72 IPR000626 GO:0005515
Dod05g0630 406 CDD UBA_scDdi1_like 369 404 - -
Dod05g0630 406 MobiDBLite consensus disorder prediction 336 365 - -
Dod05g0630 406 CDD Ubl_Ddi1_like 1 70 IPR033882 -
Dod05g0630 406 ProSiteProfiles Ubiquitin domain profile. 1 70 IPR000626 GO:0005515
Dod05g0630 406 Pfam Aspartyl protease 175 297 IPR019103 GO:0004190|GO:0006508
Dod05g0630 406 CDD RP_DDI 182 305 IPR019103 GO:0004190|GO:0006508
Dod05g0630 406 Pfam UBA/TS-N domain 369 402 IPR015940 -
Dod05g0630 406 PRINTS Ubiquitin signature 32 52 IPR019956 -
Dod05g0630 406 PRINTS Ubiquitin signature 11 31 IPR019956 -
Dod05g0630 406 PANTHER AT13091P 1 404 - -
Dod05g0630 406 SUPERFAMILY Ubiquitin-like 1 72 IPR029071 -
Dod05g0630 406 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 363 406 IPR015940 -
Dod05g0630 406 Gene3D - 1 84 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0630 1 70 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 28.571 8.13e-07 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0630 05 9435879 9445374 Dod05g0630 05 9435879 9445374 ECH