Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0628 ATGCCGGCGACAATCAACCTCCCCGCCGCCGTATCCATCGTACGATTTTCTTCTTCCGGGGACACCCCCACCCTCTCCTCCAGATTCCGCCGCTGTTCTCCGATCAGGGCCGTAGCGTCTCCGGCGATGGCGGCGGCGGCGGGGAGCCTCTACGAGGTGCTGAGAGTGGAGCACAACGCGTCGCCAACGGAAATTAAGTCGGCGTTCCGGAGCCTGGCGAAGCAATACCATCCCGACGTGGCGGTACGGCGGACGCCGGAACCCGACGGCGGCGGCGGCAACGGAGACTTCATCCAGATAAGGAACGCGTACGAGACGCTGTCGGATCCGTCGGCGAGGGCAATGTACGATCTGTCGTTGATAGGGAGGCGAAGGCGGTTATCGAAGCCGTTGGGCGGAGAACAGTCTTATTCAGGGTATTACCCGACCCGAAGATGGGAAACTGATCAATGCTGGTAG 459 0.6166 MPATINLPAAVSIVRFSSSGDTPTLSSRFRRCSPIRAVASPAMAAAAGSLYEVLRVEHNASPTEIKSAFRSLAKQYHPDVAVRRTPEPDGGGGNGDFIQIRNAYETLSDPSARAMYDLSLIGRRRRLSKPLGGEQSYSGYYPTRRWETDQCW* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0628 152 Gene3D DnaJ domain 38 130 IPR036869 -
Dod05g0628 152 SMART dnaj_3 48 112 IPR001623 -
Dod05g0628 152 CDD DnaJ 51 109 IPR001623 -
Dod05g0628 152 SUPERFAMILY Chaperone J-domain 49 122 IPR036869 -
Dod05g0628 152 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 152 - -
Dod05g0628 152 ProSiteProfiles dnaJ domain profile. 49 120 IPR001623 -
Dod05g0628 152 Pfam DnaJ domain 50 117 IPR001623 -
Dod05g0628 152 ProSitePatterns Nt-dnaJ domain signature. 97 116 IPR018253 -
Dod05g0628 152 PRINTS DnaJ domain signature 92 112 IPR001623 -
Dod05g0628 152 PRINTS DnaJ domain signature 51 69 IPR001623 -
Dod05g0628 152 PRINTS DnaJ domain signature 69 84 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0628 Dod-Chr5 9416760 9417798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0628 51 117 C2H2 Transcription Factor Family AT1G74250 41.791 1.28e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0628 - - adu:107458220 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0628 05 9416760 9417798 Dod05g0628 05 9416760 9417798 ECH
Dod05g0628 05 9416760 9417798 Dod08g0124 08 1351219 1351824 PCT