Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0625 ATGAATTATCGAAATGGAAGACCGACAAACCAGTTCAAGGACGAAGTTCCTTTAAGCCCCGAAATAAATCTTCACCAGGTGGTGGATGCACATGGATCGCATTCAGGAGAATTAATGCAGGCTGGTCATCATAAAACATTTTGGGGTGTTGTTTGCAGAAGCATACAAGTTGTGTTGTTCTCCAACAGGCTCAACTTGCTAATGCCTTTTGGGCCTGTTGCAATTCTTGTACAGAAATTGACTGGTCATCATGGCTGGGTCTTTGGTTTGAGTTTGTTGGGCATGGTGCCTCTGGCGGAGCGGTTGGGTTATGCCACGGAGCAGCTGGCATCTTACACTGGAGATACTGCTGGTGCTCTTTTAAATGCTACATTTGGAAATGCAACAGAATTGATCATCTCAATATATGCATTGAAAAATGGAATGACCCGAGTTGTCAAGCTCTCTTTGCTGGGCTCAATCTTATCAGATATGCTGCTGGTGCTTGGATGTGCCTTCTTAGGTGGTGGGATTGTTTATCATGAGAAGGAACAAGTGTTTGATAAGGCAACTGCTACTGTTAATTCAGGATTGTTGCTGATGGCGGTTATGGGCCTGTTTTTTCCAGCTGTTCTTCATTATACACACACCGAAGTGCATTTTGGGACGTCAGAATTGGCGCTTTCAAGATTCAGCAGCTGCGTCATGCTTGTGGCCTATGCTGCATACCTGTTTTTCCAGTTAAAAAGTCAAAGAAGGACCTATGTCTCCGTGAATGAGGCTGACAACCCCGAAGAGGGCCAGACTGGAAACAACTCAAATGATGATGATGAATCTCCAGATATTTCTAAATGGGAATCAATAATCTGGCTTTTGGTAATGACTGCTTGGATATCAATCCTTTCAGAATATTTGGTTGGTGCTATAGAGGGAGCATCTACTGCATGGAAAATGTCAGTAGCATTTATTAGTGTTATATTGCTCCCATTAGCGTCGAATGCAGCAGAACATGCCAGTGCTATCGTGTTTGCCATGAAAGATAAATTAGAAATTTCCTTGGGAATAGCAATTGGGGCATCCACACAGATAGCTATGTTTGTGATACCATTTTGTGTGGTTATTGGCTGGATATTGGGGCACCCTATGGACCTAAACTTTCAACTTTTTGAGACTTCAGCACTATTTCTGACTGTTATAGTCACTGCCCTCATGTTACAGGAAGGAACTGCTCATTACTTCAAGGGACTAATGCTTGTTCTTTGCTATCTGATAGTGGCAGCTAGTTTCTATGTACATGTAGATTCCACTTCAGTGGGCCCGATTGTTTCCTAA 1311 0.4294 MNYRNGRPTNQFKDEVPLSPEINLHQVVDAHGSHSGELMQAGHHKTFWGVVCRSIQVVLFSNRLNLLMPFGPVAILVQKLTGHHGWVFGLSLLGMVPLAERLGYATEQLASYTGDTAGALLNATFGNATELIISIYALKNGMTRVVKLSLLGSILSDMLLVLGCAFLGGGIVYHEKEQVFDKATATVNSGLLLMAVMGLFFPAVLHYTHTEVHFGTSELALSRFSSCVMLVAYAAYLFFQLKSQRRTYVSVNEADNPEEGQTGNNSNDDDESPDISKWESIIWLLVMTAWISILSEYLVGAIEGASTAWKMSVAFISVILLPLASNAAEHASAIVFAMKDKLEISLGIAIGASTQIAMFVIPFCVVIGWILGHPMDLNFQLFETSALFLTVIVTALMLQEGTAHYFKGLMLVLCYLIVAASFYVHVDSTSVGPIVS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0625 436 MobiDBLite consensus disorder prediction 253 269 - -
Dod05g0625 436 Gene3D - 267 424 IPR044880 -
Dod05g0625 436 Gene3D - 113 253 IPR044880 -
Dod05g0625 436 MobiDBLite consensus disorder prediction 253 274 - -
Dod05g0625 436 TIGRFAM cax: calcium/proton exchanger 68 423 IPR004798 GO:0006816|GO:0015369
Dod05g0625 436 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 6 431 - -
Dod05g0625 436 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 6 431 IPR004713 GO:0006812|GO:0008324|GO:0016021
Dod05g0625 436 Pfam Sodium/calcium exchanger protein 280 421 IPR004837 GO:0016021|GO:0055085
Dod05g0625 436 Pfam Sodium/calcium exchanger protein 86 241 IPR004837 GO:0016021|GO:0055085
Dod05g0625 436 TIGRFAM caca2: calcium/proton exchanger 54 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0625 Dod-Chr5 9363409 9370324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0625 19 427 Antiporters AT1G55730 67.482 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0625 K07300 - gmx:100799276 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0625 05 9363409 9370324 Dod05g0625 05 9363409 9370324 ECH