Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0624 ATGGAGTCTCGAGTTGAAGTGAAACCAACTCTGATTGCCTCCGGATTCTTAGATGACTTGTCTGAGACTGGCAAGATGAATTCTCCAATTGGAAGACCAACGAACAAGTTTGAGGATGAAGTTCCTTTTCGCTGCGAAATAGCTCTTCACCAGTCAAACTCTACTCGGGTGGATGCACATGGATCGCATTCGGAAGAATTGCAGGTTGCTCATCATAAAACATTTAGGGGTATTGTCTACAGGAGCATACGAGTTGTGTTGTTCTCAAACAGACTCAACTTGCTTATACCTTTTGGGCCTATTGCAATTCTTGTAAAGAAATTGAGTGGTCATCATGGTTGGGTCTTTGGTATGAGTTTATTGGGTATAATGCCTCTGGCGGAGCGGTTAGGTTATGCGACAGAGCAGCTGGCATTTTACACTGGAGATACTGTTGGGGGTCTTTTAAATGCTACCTTTGGAAATGCAACAGAATTGATCATCTCAATATATGCACTGAAAAGTGGAATGATGCGAGTTGTCCAGCTCTCTTTGCTGGGCTCAATTTTATCAAATATGCTACTAGTGCTTGGATGTGCATTCTTAAGTGGTGGGATTGTTTATCATGAGAAGGAACAAGTGTTCAATAAGGCAACTGCTACTGTTAATTCAGGATTGTTGCTGATGGCAGTGATGGGCCTACTTTTTCCGGCTGTTCTTCATTATACACACTCCGAAGTGCATTTTGGGAAGTCAGAATTGGCGCTTTCAAGATTCAGCAGCTGCGTCATGCTCGTGGCCTATGCCGCATACCTATTTTTCCAGTTAAAAAGTCAAAATAGTCCTTATGTCTCCATGAATGAGGTTGACAATGCCGAAGAGGGCCAGACTGGAAACAACTCAAATAATTATGATGAATCTCCAGATATTTCTAAATGGGAATCAATAATATGGCTTTTGGTTATGACTGCTTGGATATCAATCCTTTCAGAATATTTGGTCGGCGCTATAGAGGGAGCATCTACTGTATGGAAAATGTCAGTAGCATTTATTAGTGTTATATTGCTTCCACTTGTGGGGAATGCAGCAGAACATGCCAGTGCTATCATGTTTGCCATGAAAGATAAATTAGACATTTCCTTAGGAGTAGCAATTGGGTCATCCACACAGATATCTATGTTTGTGATACCTTTTTGTGTGGTTATTGGCTGGGTAATGGGGCACCCTATGGACCTAAACTTTCAACTTTTTGAGACTGCAGTACTATTTCTGACTGTTATAGTTGTTGCCTTCATGTTACAGGAAGGAACTGCTAATTACTTCAAGGGACTAATGCTTGTTCTTTGCTATCTGATAGTGGCAGCTAGTTTCTATGTACATGTAGATTTCACTTCAGTAGGCCAGTCCTAA 1389 0.4132 MESRVEVKPTLIASGFLDDLSETGKMNSPIGRPTNKFEDEVPFRCEIALHQSNSTRVDAHGSHSEELQVAHHKTFRGIVYRSIRVVLFSNRLNLLIPFGPIAILVKKLSGHHGWVFGMSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISIYALKSGMMRVVQLSLLGSILSNMLLVLGCAFLSGGIVYHEKEQVFNKATATVNSGLLLMAVMGLLFPAVLHYTHSEVHFGKSELALSRFSSCVMLVAYAAYLFFQLKSQNSPYVSMNEVDNAEEGQTGNNSNNYDESPDISKWESIIWLLVMTAWISILSEYLVGAIEGASTVWKMSVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWVMGHPMDLNFQLFETAVLFLTVIVVAFMLQEGTANYFKGLMLVLCYLIVAASFYVHVDFTSVGQS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0624 462 TIGRFAM caca2: calcium/proton exchanger 83 450 - -
Dod05g0624 462 Gene3D - 141 281 IPR044880 -
Dod05g0624 462 Gene3D - 295 452 IPR044880 -
Dod05g0624 462 Pfam Sodium/calcium exchanger protein 308 449 IPR004837 GO:0016021|GO:0055085
Dod05g0624 462 Pfam Sodium/calcium exchanger protein 114 269 IPR004837 GO:0016021|GO:0055085
Dod05g0624 462 TIGRFAM cax: calcium/proton exchanger 96 451 IPR004798 GO:0006816|GO:0015369
Dod05g0624 462 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 29 458 - -
Dod05g0624 462 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 29 458 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0624 Dod-Chr5 9350520 9356982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0624 35 455 Antiporters AT1G55730 69.596 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0624 K07300 - gmx:100799276 742.651