Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod05g0618 | ATGGGGCGCATTCCATGCTGTGAGAAGGACAACGTGAAAAGAGGACAGTGGACTCCTGAGGAAGACAACAAGCTCTCCTCCTACATTGCCCAACATGGGACCCGCAACTGGCGCCTTATCCCCAAGAATGCTGGTCTCCAGAGATGTGGAAAGAGCTGCAGGCTAAGGTGGACTAACTACCTTCGTCCTGATCTCAAACATGGCCAATTCTCTGATTCAGAAGAGCAAACCATTGTGAAGCTTCACTCAGTTTTTGGAAACAGGTGGTCACTGATAGCAGCCCAGCTTCCAGGGCGCACTGATAATGATGTCAAAAACCACTGGAACACCAAGCTGAAGAAGAAACTTTCAGGCATGGGTATTGACCCTGTAACCCACAAGCCATTCTCACATCTAATGGCTGAAATTGCTACAACATTGGCACCACCTCAGGCAGCACACCTGGCTGAAGCAGCACTCGGCTGCTTCAAAGATGAGGTCCTCCACCTTCTGACCAAGAAGCCAATTAACTTCCAAGGCCAGCATTCCAATGTAGCACCAGGGAATAACATTACAGATTACATTAACTGCAAGCCAGAAGAGAAAGATGACACTGTTGAGAAGATTGAGCTTGGCCTCTCAAAGGCCATGCAAGAAGAACCTGAAATGATACCTAACAAACCTTGGGACTCCACTGCAGCTACATCTGCAAATTATGCTACGCCATACAGTGTTTTCCCTACAATGCAAGGGTTTCAATTCAATCCAGCATCTTTTGGCAGTAAGGGGGATGCATCACCATGGAGCCAGAGTATATGTACAGGAAGCACATGCACGGCCTTGGATCAGCAAAACCAGTTACATGAAAAGCTTGAAGAAAATGGGGATGATTCCGAGGCCACAAAAGAGATTAGAAATCTTCGCAATATATTCAACTCAGACTGTGTCTTGTGGGATTTACCAGCAGATGATTTAATTAACCCCATGGTATAA | 972 | 0.465 | MGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSDSEEQTIVKLHSVFGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKPFSHLMAEIATTLAPPQAAHLAEAALGCFKDEVLHLLTKKPINFQGQHSNVAPGNNITDYINCKPEEKDDTVEKIELGLSKAMQEEPEMIPNKPWDSTAATSANYATPYSVFPTMQGFQFNPASFGSKGDASPWSQSICTGSTCTALDQQNQLHEKLEENGDDSEATKEIRNLRNIFNSDCVLWDLPADDLINPMV* | 324 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod05g0618 | 323 | Coils | Coil | 274 | 294 | - | - | |
Dod05g0618 | 323 | PANTHER | TRANSCRIPTION FACTOR MYB80 | 1 | 323 | - | - | |
Dod05g0618 | 323 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Dod05g0618 | 323 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 65 | IPR017930 | - | |
Dod05g0618 | 323 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - | |
Dod05g0618 | 323 | Gene3D | - | 14 | 66 | - | - | |
Dod05g0618 | 323 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 66 | 116 | IPR017930 | - | |
Dod05g0618 | 323 | PANTHER | F14D16.11-RELATED | 1 | 323 | - | - | |
Dod05g0618 | 323 | CDD | SANT | 70 | 112 | IPR001005 | - | |
Dod05g0618 | 323 | CDD | SANT | 17 | 61 | IPR001005 | - | |
Dod05g0618 | 323 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Dod05g0618 | 323 | Pfam | Myb-like DNA-binding domain | 68 | 110 | IPR001005 | - | |
Dod05g0618 | 323 | SMART | sant | 13 | 63 | IPR001005 | - | |
Dod05g0618 | 323 | SMART | sant | 66 | 114 | IPR001005 | - | |
Dod05g0618 | 323 | Gene3D | - | 69 | 128 | - | - | |
Dod05g0618 | 323 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod05g0618 | Dod-Chr5 | 9272727 | 9274079 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod05g0618 | 1 | 323 | MYB Transcription Factor Family | AT5G56110 | 57.704 | 2.88e-119 | 344 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Dod05g0618 | Myb_DNA-binding | 1.6e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod05g0618 | K09422 | - | gmx:100800764 | 589.341 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod05g0618 | 05 | 9272727 | 9274079 | Dod05g0618 | 05 | 9272727 | 9274079 | ECH |